RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Mcur1Q9CXD6 340 aa17.15■□□□□ 0.34
Ccdc50-203ENSMUST00000100026 KdrP35918 1367 aa17.15■□□□□ 0.34
Ccdc50-203ENSMUST00000100026 Nkx1-2P42580 305 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sik1Q60670 779 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Jade3Q6IE82 823 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Tnip1Q9WUU8 647 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Parp2O88554 559 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Vat1lQ80TB8 417 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Slx4Q6P1D7 1565 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Zkscan7E9PVW1 718 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Slc18a1Q8R090 521 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Syce1Q9D495 329 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 LratQ9JI60 231 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Als2cr12Q8BVM7 383 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ccdc6D3YZP9 469 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Tagap1P0CAX8 505 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Fgfr1opQ66JX5 399 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Acnat2Q8BGG9 420 aa17.14■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ccdc42Q5SV66 316 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Zcrb1Q9CZ96 217 aaKnown RBP17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Abcc1O35379 1528 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Top2bQ64511 1612 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Bin2D3Z6Q9 489 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Gm38392E9Q2A2 434 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ier5O89113 308 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Smc1bQ920F6 1248 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Abcc4E9Q236 1325 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 VrtnQ3SYK4 740 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 MaeaQ4VC33 396 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Luc7l2Q7TNC4 392 aaKnown RBP17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Bicd1Q8BR07 835 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Uspl1Q3ULM6 1089 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Lmbrd2Q8C561 694 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 BC005561E9Q5E2 1589 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 XpcP51612 930 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 CalcaP70160 136 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Rapgef1Q3UHC1 1224 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Cep135Q6P5D4 1140 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Bbs5Q9CZQ9 341 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Slx4ipQ9D7Y9 413 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Phkg2Q9DB30 406 aa17.13■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sptlc2P97363 560 aaKnown RBP17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Tnpo2Q99LG2 887 aaKnown RBP17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Zfp213E9QAW0 468 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Cfap100Q80VN0 613 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Lin9Q8C735 542 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Terf2ipQ91VL8 393 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Trpc3Q9QZC1 836 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 LarsQ8BMJ2 1178 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ak2Q9WTP6 239 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Fyb2A2A995 729 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Prl3d2F6R3P9 224 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Apol10bG3X9K7 334 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Tcp11l1Q8BTG3 509 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ubac1Q8VDI7 409 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Yeats4Q9CR11 227 aaKnown RBP17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Zmym4A2A791 1549 aaKnown RBP17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 NpatQ8BMA5 1420 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Rprd2Q6NXI6 1469 aaKnown RBP17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Iqsec3Q3TES0 1195 aa17.12■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Timm10P62073 90 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Zbtb45Q52KG4 520 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Paxip1Q6NZQ4 1056 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Mettl5Q8K1A0 209 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 PzpQ61838 1495 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Nlrx1Q3TL44 975 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Usp11Q99K46 921 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ccnt1Q9QWV9 724 aaKnown RBP17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Tspyl1O88852 379 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Gsta4P24472 222 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 FibpQ9JI19 357 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sycp2lA0A0M3U1B0 842 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sult6b1P0CC03 303 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ifih1Q8R5F7 1025 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sept6Q9R1T4 434 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Gli2Q0VGT2 1544 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Hmgb1P63158 215 aaKnown RBP17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ddx31Q6NZQ2 687 aaKnown RBP17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ctdp1Q7TSG2 960 aa17.11■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Stxbp3Q60770 592 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Eef2P58252 858 aaKnown RBP17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Drc3Q9D5E4 523 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Gm10378F6XQQ1 160 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Rpl13P47963 211 aaKnown RBP17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Igbp1Q61249 340 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Kif17Q99PW8 1038 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 InhbeO08717 350 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Rnaseh1O70338 285 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ubn1Q4G0F8 1135 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Stac3Q8BZ71 360 aa17.1■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Ppp1r1bQ60829 194 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Pik3c2gO70167 1506 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Abcb4P21440 1276 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Crybg3Q80W49 1005 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Sec63Q8VHE0 760 aaKnown RBP17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Eya2O08575 532 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Prdm1Q60636 856 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Brd3Q8K2F0 726 aaKnown RBP17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 Mmel1Q9JLI3 765 aa17.09■□□□□ 0.33
Ccdc50-203ENSMUST00000100026 CebpzP53569 1052 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms