RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A1W2PPE2 198 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 GPR37O15354 613 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 PPYP01298 95 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 EDN3P14138 238 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 UCP3P55916 312 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 MLF1P58340 268 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 MALLQ13021 153 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 EXT1Q16394 746 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 RNF212Q495C1 297 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 SLC23A3Q6PIS1 610 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 AAED1Q7RTV5 226 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 TDHQ8IZJ6 230 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 AGBL5Q8NDL9 886 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 FAM213BQ8TBF2 198 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 CD300LFQ8TDQ1 290 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 C11orf1Q9H5F2 150 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 WDFY4Q6ZS81 3184 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 MPPED1O15442 326 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 KLK3P07288 261 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-233ENST00000642021 FUT6P51993 359 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
PHGDH-233ENST00000642021 SLC25A26Q70HW3 274 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 M1APQ8TC57 530 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 SLC7A10Q9NS82 523 aa11.92□□□□□ -0.5
PHGDH-233ENST00000642021 IGSF23A1L1A6 192 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 K7N7A8 449 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 OMGP23515 440 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 ZNF561Q8N587 486 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 ZNF611Q8N823 705 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 OR14L1PQ8NHC6 308 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 TMEM171Q8WVE6 324 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 SLC35B3Q9H1N7 401 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 IL36GQ9NZH8 169 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 CRIM1Q9NZV1 1036 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 FRYQ5TBA9 3013 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 ARGFXA6NJG6 315 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 UBE2CO00762 179 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 FUT3P21217 361 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 SULT1A1P50225 295 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 HERV-K104P61576 105 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 IL11RAQ14626 422 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-233ENST00000642021 ADAM5Q6NVV9 412 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 OR2C3Q8N628 320 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 CPEB3Q8NE35 698 aaKnown RBP11.91□□□□□ -0.5
PHGDH-233ENST00000642021 TAAR9Q96RI9 348 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 SLC7A11Q9UPY5 501 aa11.91□□□□□ -0.5
PHGDH-233ENST00000642021 ZNF724A8MTY0 619 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 CDRT15L2A8MXV6 281 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 SLC33A1O00400 549 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-233ENST00000642021 CYC1P08574 325 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 RAB5AP20339 215 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 HOXA6P31267 233 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 GLP1RP43220 463 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 OR8B8Q15620 311 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 TRIM61Q5EBN2 209 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 TMEM211Q6ICI0 200 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 ODF3L1Q8IXM7 274 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 KCNJ16Q9NPI9 418 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 ATP6V0CP27449 155 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 OR2B8PP59922 312 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 GNMTQ14749 295 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 WIPI1Q5MNZ9 446 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-233ENST00000642021 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 ZNF845Q96IR2 970 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-233ENST00000642021 FGF23Q9GZV9 251 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-233ENST00000642021 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
PHGDH-233ENST00000642021 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.5
PHGDH-233ENST00000642021 CCDC163A0A0D9SF12 145 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 TRDCB7Z8K6 153 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 PROB1E7EW31 1015 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM50AO95807 157 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 SCTP09683 121 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 RAB5CP51148 216 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 MAJINQ3KP22 176 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 DMRTC2Q8IXT2 367 aaPredicted RBP11.9□□□□□ -0.51
PHGDH-233ENST00000642021 ZFP62Q8NB50 900 aaPredicted RBP11.9□□□□□ -0.51
PHGDH-233ENST00000642021 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.51
PHGDH-233ENST00000642021 GPR35Q9HC97 309 aa11.9□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF816-ZNF321PA0A0X1KG74 233 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 GJE1A6NN92 205 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms