RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 HPXP02790 462 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 GLRA1P23415 457 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 ACTBL2Q562R1 376 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SPIN3Q5JUX0 258 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 C20orf204Q6ZNR8 217 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 OVCH2Q7RTZ1 564 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 GCSAMQ8N6F7 178 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 LRRC46Q96FV0 321 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 PRRT1Q99946 306 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SEC22CQ9BRL7 303 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 OR14J1Q9UGF5 321 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SCP2D1Q9UJQ7 156 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 VSIG4Q9Y279 399 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 HMX3A6NHT5 357 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 A8MV72 311 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SRRM5B3KS81 715 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 MCRIP1C9JLW8 97 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 CLDN14O95500 239 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 HAND1O96004 215 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SERPINF1P36955 418 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 GATA4P43694 442 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 TAS2R46P59540 309 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 MRPS15P82914 257 aaKnown RBP14.8□□□□□ -0.04
PHGDH-232ENST00000641947 TNFAIP6P98066 277 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-232ENST00000641947 BEX5Q5H9J7 111 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 ATPAF1Q5TC12 328 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-232ENST00000641947 C17orf107Q6ZR85 190 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SLC36A1Q7Z2H8 476 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 PLPPR1Q8TBJ4 325 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 MRPL30Q8TCC3 161 aaKnown RBP14.8□□□□□ -0.04
PHGDH-232ENST00000641947 LIME1Q9H400 295 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 SPACA1Q9HBV2 294 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 GCM1Q9NP62 436 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 EHFQ9NZC4 300 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 METRNQ9UJH8 293 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 ZDHHC8Q9ULC8 765 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 RNF115Q9Y4L5 304 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 COL12A1Q99715 3063 aa14.8□□□□□ -0.04
PHGDH-232ENST00000641947 TPD52L2O43399 206 aaKnown RBP14.79□□□□□ -0.04
PHGDH-232ENST00000641947 ZNF205O95201 554 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 MST1LQ2TV78 715 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 CHRFAM7AQ494W8 412 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 AKAP14Q86UN6 197 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 LHFPL1Q86WI0 220 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 OR10Z1Q8NGY1 313 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 NEK7Q8TDX7 302 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 ETAA1Q9NY74 926 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 IL19Q9UHD0 177 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 EDARQ9UNE0 448 aa14.79□□□□□ -0.04
PHGDH-232ENST00000641947 C17orf100A8MU93 164 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 PSPNO60542 156 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 LHBP01229 141 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 RLN1P04808 185 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 IFNA6P05013 189 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ADH4P08319 380 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CFHR2P36980 270 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CBX3Q13185 183 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CDK10Q15131 360 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ZMYND11Q15326 602 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 PAN3Q58A45 887 aaKnown RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 FAM201AQ5SY85 155 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 AADACL3Q5VUY0 350 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 GLDNQ6ZMI3 551 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ARRDC1Q8N5I2 433 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 OR52B4Q8NGK2 314 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CAPSLQ8WWF8 208 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 PIK3IP1Q96FE7 263 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 SLC25A21Q9BQT8 299 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 TMEM204Q9BSN7 226 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 PPA2Q9H2U2 334 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 OR51J1Q9H342 316 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CHMP1AQ9HD42 196 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 Q9N2K0 584 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 DCAF16Q9NXF7 216 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 TREM2Q9NZC2 230 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 USP9XQ93008 2570 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 TMEM82A0PJX8 343 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 C19orf84I3L1E1 186 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 OR3A3P47888 321 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 RRAS2P62070 204 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CCL8P80075 99 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ZNF660Q6AZW8 331 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ZNF808Q8N4W9 903 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-232ENST00000641947 CD177Q8N6Q3 437 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 OR5T2Q8NGG2 359 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 OR6F1Q8NGZ6 308 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ST6GAL2Q96JF0 529 aa14.78□□□□□ -0.04
PHGDH-232ENST00000641947 ZNF462Q96JM2 2506 aa14.77□□□□□ -0.04
PHGDH-232ENST00000641947 IGHV3OR15-7A0A075B7D8 119 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 RFPL4AA6NLU0 287 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 RFPL4AL1F8VTS6 287 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 M0R233 179 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 SH2D1BO14796 132 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 KNG1P01042 644 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 GLAP06280 429 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 CD55P08174 381 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 GSTT2P0CG29 244 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 TRAPPC2P0DI81 140 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 TRAPPC2BP0DI82 140 aa14.77□□□□□ -0.05
PHGDH-232ENST00000641947 AGAP20933 346 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms