RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 NR1H4Q96RI1 486 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-231ENST00000641939 MEGF9Q9H1U4 602 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 PPA2Q9H2U2 334 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 VCX3BQ9H321 246 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 SCN3BQ9NY72 215 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 CKLFQ9UBR5 152 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 VPREB3Q9UKI3 123 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 UBE2J1Q9Y385 318 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-231ENST00000641939 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
PHGDH-231ENST00000641939 A0A1B0GUS0 222 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 PTGES3LE9PB15 166 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 GPX5O75715 221 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 CSN2P05814 226 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 CELP19835 753 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 FSTP19883 344 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 PTGFRP43088 359 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 OR3A4PP47883 348 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 RELBQ01201 579 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 AESQ08117 197 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 TRAPPC6BQ86SZ2 158 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 Q8NFD4 153 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 OR51T1Q8NGJ9 327 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 OR10K1Q8NGX5 313 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 MYDGFQ969H8 173 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 OR14A2Q96R54 314 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 NKX3-1Q99801 234 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-231ENST00000641939 SSX3Q99909 188 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 BEX1Q9HBH7 125 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 SESN1Q9Y6P5 492 aa12.22□□□□□ -0.45
PHGDH-231ENST00000641939 MGAM2Q2M2H8 2515 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 TRAV8-7A0A075B6U6 113 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 H0YHG0 523 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 CLPXO76031 633 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 CDRT1O95170 752 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 HTR3BO95264 441 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 MYF6P23409 242 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 GLIPR1P48060 266 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 BDH1Q02338 343 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 DOC2BQ14184 412 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 IL13RA2Q14627 380 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 LRRC75BQ2VPJ9 315 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 OR11H6Q8NGC7 330 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 DERL3Q96Q80 235 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 S100A13Q99584 98 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 ZNF184Q99676 751 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-231ENST00000641939 CDCA4Q9BXL8 241 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 METTL9Q9H1A3 318 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 GAL3ST2Q9H3Q3 398 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 IL36GQ9NZH8 169 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
PHGDH-231ENST00000641939 A0A1W2PPK0 400 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ODAMA1E959 279 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 FAM90A8PA6NJQ4 464 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 H3BUX3 64 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ARG1P05089 322 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TGFBR2P37173 567 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-231ENST00000641939 AANATQ16613 207 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 PIGYQ3MUY2 71 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 PAN3Q58A45 887 aaKnown RBP12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-231ENST00000641939 LHFPL4Q7Z7J7 247 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 CORO2AQ92828 525 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 COQ2Q96H96 371 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 ANKRD60Q9BZ19 345 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 SLITRK2Q9H156 845 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TAS2R3Q9NYW6 316 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TPRKBQ9Y3C4 175 aa12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TBL2Q9Y4P3 447 aaKnown RBP12.2□□□□□ -0.46
PHGDH-231ENST00000641939 TRAV24A0A0B4J272 114 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 CLPSL1A2RUU4 121 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 MAGEA13PA6NCF6 341 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 HSPB6O14558 160 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
PHGDH-231ENST00000641939 PAX6P26367 422 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 HSPA13P48723 471 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 SLC35A2P78381 396 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
PHGDH-231ENST00000641939 OLFML2AQ68BL7 652 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 IZUMO2Q6UXV1 221 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 OSR2Q8N2R0 312 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 SGMS2Q8NHU3 365 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 SGCDQ92629 289 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 THRSPQ92748 146 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 FOXRED1Q96CU9 486 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-231ENST00000641939 OR5M11Q96RB7 305 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 CLEC7AQ9BXN2 247 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 PCDHB16Q9NRJ7 776 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 ING3Q9NXR8 418 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
PHGDH-231ENST00000641939 ST3GAL6Q9Y274 331 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms