RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PPA2Q9H2U2 334 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 PRDM13Q9H4Q3 707 aa21.84■■□□□ 1.09
VEGFA-231ENST00000640499 METTL8Q9H825 291 aaKnown RBP21.84■■□□□ 1.09
VEGFA-231ENST00000640499 C17orf98A8MV24 154 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 BPIFB3P59826 476 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 IL13RA2Q14627 380 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 NHLRC3Q5JS37 347 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 GLIPR1L1Q6UWM5 242 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 OSR2Q8N2R0 312 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 CHST4Q8NCG5 386 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 COQ2Q96H96 371 aa21.83■■□□□ 1.09
VEGFA-231ENST00000640499 MRPS28Q9Y2Q9 187 aaKnown RBP21.83■■□□□ 1.09
VEGFA-231ENST00000640499 MEGF11A6BM72 1044 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 SERPINA2P20848 420 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 ERP29P30040 261 aaKnown RBP21.82■■□□□ 1.08
VEGFA-231ENST00000640499 GABRA5P31644 462 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 RBM11P57052 281 aaKnown RBP21.82■■□□□ 1.08
VEGFA-231ENST00000640499 MEF2CQ06413 473 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-231ENST00000640499 TRAM1Q15629 374 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 SLC22A6Q4U2R8 563 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 HSD17B12Q53GQ0 312 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 ZNF773Q6PK81 442 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 NKAIN3Q8N8D7 197 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 TBC1D15Q8TC07 691 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 TCF7L1Q9HCS4 588 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 ST3GAL6Q9Y274 331 aa21.82■■□□□ 1.08
VEGFA-231ENST00000640499 GLIPR1P48060 266 aa21.81■■□□□ 1.08
VEGFA-231ENST00000640499 P2RX3P56373 397 aa21.81■■□□□ 1.08
VEGFA-231ENST00000640499 AESQ08117 197 aa21.81■■□□□ 1.08
VEGFA-231ENST00000640499 SVOPQ8N4V2 548 aa21.81■■□□□ 1.08
VEGFA-231ENST00000640499 UQCC2Q9BRT2 126 aa21.81■■□□□ 1.08
VEGFA-231ENST00000640499 A0A1W2PRD5 423 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 A0A1W2PRF3 423 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 A0A1W2PRM7 423 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 RNF212BA8MTL3 300 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 GEMIN2O14893 280 aaKnown RBP21.8■■□□□ 1.08
VEGFA-231ENST00000640499 CSN2P05814 226 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 ZNF728P0DKX0 622 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 PSMA1P25786 263 aaKnown RBP21.8■■□□□ 1.08
VEGFA-231ENST00000640499 C1orf100Q5SVJ3 147 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 CD200R1LQ6Q8B3 271 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 TMEM104Q8NE00 496 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 PPP1R35Q8TAP8 253 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 TMEM158Q8WZ71 300 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 AJUBAQ96IF1 538 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 CYYR1Q96J86 154 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 IFT22Q9H7X7 185 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 NDUFB11Q9NX14 153 aa21.8■■□□□ 1.08
VEGFA-231ENST00000640499 A0A0U1RQK1 487 aa21.79■■□□□ 1.08
VEGFA-231ENST00000640499 ZNF780AO75290 641 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-231ENST00000640499 BLMHQ13867 455 aa21.79■■□□□ 1.08
VEGFA-231ENST00000640499 KCTD21Q4G0X4 260 aa21.79■■□□□ 1.08
VEGFA-231ENST00000640499 DUX5Q96PT3 197 aa21.79■■□□□ 1.08
VEGFA-231ENST00000640499 KIAA2026Q5HYC2 2103 aa21.79■■□□□ 1.08
VEGFA-231ENST00000640499 hADV38S2A0JD32 116 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 HSPB6O14558 160 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 CSTBP04080 98 aaKnown RBP21.78■■□□□ 1.08
VEGFA-231ENST00000640499 UBE2E1P51965 193 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 ATXN7L3Q14CW9 347 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-231ENST00000640499 AWAT2Q6E213 333 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 S100A13Q99584 98 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 BANF2Q9H503 90 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 LINC00312Q9Y6C7 94 aa21.78■■□□□ 1.08
VEGFA-231ENST00000640499 A0A1W2PPH5 198 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 SHISA3A0PJX4 238 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 DNAJC9-AS1A6NH13 148 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 NPFFO15130 113 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 MMP23AO75900 390 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 GTF2F2P13984 249 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 UBA52P62987 128 aaKnown RBP21.77■■□□□ 1.08
VEGFA-231ENST00000640499 SLC9A3R2Q15599 337 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 TAF9Q16594 264 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 NCR3LG1Q68D85 454 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 Q6YL49 198 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 ZNF782Q6ZMW2 699 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-231ENST00000640499 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-231ENST00000640499 PLPPR1Q8TBJ4 325 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 C17orf50Q8WW18 174 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 CORO2AQ92828 525 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 SLC25A28Q96A46 364 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 ZNF714Q96N38 554 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 C19orf24Q9BVV8 132 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 ING3Q9NXR8 418 aa21.77■■□□□ 1.08
VEGFA-231ENST00000640499 GUCA2AQ02747 115 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 BAMBIQ13145 260 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 GPR176Q14439 515 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 PAN3Q58A45 887 aaKnown RBP21.76■■□□□ 1.07
VEGFA-231ENST00000640499 KRBOX4Q5JUW0 171 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 BRICD5Q6PL45 260 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 SUMF2Q8NBJ7 301 aa21.76■■□□□ 1.07
VEGFA-231ENST00000640499 AK6Q9Y3D8 172 aaKnown RBP21.76■■□□□ 1.07
VEGFA-231ENST00000640499 ODAMA1E959 279 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 SLC22A1O15245 554 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 OR7C1O76099 320 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 CGB3P0DN86 165 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 CGB7P0DN87 165 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 IGHV1-8P0DP01 117 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 CALRP27797 417 aaKnown RBP21.75■■□□□ 1.07
VEGFA-231ENST00000640499 QRFPP83859 136 aa21.75■■□□□ 1.07
VEGFA-231ENST00000640499 RSBN1Q5VWQ0 802 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms