RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TMEM38AQ9H6F2 299 aa1.78□□□□□ -2.12
ATM-230ENST00000640388 RPF2Q9H7B2 306 aaKnown RBP1.78□□□□□ -2.12
ATM-230ENST00000640388 RETNQ9HD89 108 aa1.78□□□□□ -2.12
ATM-230ENST00000640388 GGA2Q9UJY4 613 aa1.78□□□□□ -2.12
ATM-230ENST00000640388 YARS2Q9Y2Z4 477 aaKnown RBP1.78□□□□□ -2.12
ATM-230ENST00000640388 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.12
ATM-230ENST00000640388 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ERICH4A6NGS2 130 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CENPXA8MT69 81 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 E7EWF7 191 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 F6UB75 175 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ZW10O43264 779 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 RAD51CO43502 376 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 HCRTO43612 131 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 SS18L1O75177 396 aaPredicted RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 ETHE1O95571 254 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 RAB3DO95716 219 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 AIFM1O95831 613 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 HPRT1P00492 218 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ARG1P05089 322 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 KLK1P06870 262 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 SOD3P08294 240 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 KRT16P08779 473 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CALM1P0DP23 149 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CALM2P0DP24 149 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CALM3P0DP25 149 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 IGFBP3P17936 291 aaPredicted RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 PMCHP20382 165 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 PRKACBP22694 351 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 WARSP23381 471 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 IVDP26440 423 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CD70P32970 193 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 SLC26A3P40879 764 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 RFC3P40938 356 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MNAT1P51948 309 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 PSMD4P55036 377 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 UBE2MP61081 183 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 MOBPQ13875 183 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 RCAN2Q14206 197 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 PRPSAP1Q14558 356 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ZNF829Q3KNS6 432 aaPredicted RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 KIAA2026Q5HYC2 2103 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 THEM4Q5T1C6 240 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ADNP2Q6IQ32 1131 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 LCN12Q6JVE5 192 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 RWDD4Q6NW29 188 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 MBOAT1Q6ZNC8 495 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MBOAT2Q6ZWT7 520 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ARHGAP18Q8N392 663 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MREGQ8N565 214 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 TRIML2Q8N7C3 387 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CYB561D1Q8N8Q1 229 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ASCC1Q8N9N2 400 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 DRAXINQ8NBI3 349 aaPredicted RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 CCDC54Q8NEL0 328 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 OR2L8Q8NGY9 312 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 OR4S2Q8NH73 311 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 OR10G6Q8NH81 332 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 CD300LFQ8TDQ1 290 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ISOC2Q96AB3 205 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 EEF1AKMT3Q96AZ1 226 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ECHDC3Q96DC8 303 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 SUCNR1Q9BXA5 334 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 KIR3DX1Q9H7L2 352 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MRM3Q9HC36 420 aaKnown RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 ACP6Q9NPH0 428 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 XPNPEP1Q9NQW7 623 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MCUBQ9NWR8 336 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ZNF629Q9UEG4 869 aaPredicted RBP1.77□□□□□ -2.13
ATM-230ENST00000640388 CFAP45Q9UL16 551 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 DDX19BQ9UMR2 479 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 FLVCR2Q9UPI3 526 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 ST3GAL6Q9Y274 331 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 HEBP2Q9Y5Z4 205 aa1.77□□□□□ -2.13
ATM-230ENST00000640388 MYH11P35749 1972 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 DOCK4Q8N1I0 1966 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 PRSS37A4D1T9 235 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 HSBP1L1C9JCN9 74 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 H3BN98 237 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 K7EMT4 169 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 K7ERQ8 282 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 GMDSO60547 372 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 VAPBO95292 243 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 OXTP01178 125 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 BGLAPP02818 100 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 RAB3BP20337 219 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 PRTN3P24158 256 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 KCNJ3P48549 501 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 XIAPP98170 497 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 TMEM183BQ1AE95 376 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 RSPO1Q2MKA7 263 aaPredicted RBP1.76□□□□□ -2.13
ATM-230ENST00000640388 RFX4Q33E94 735 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 TPTE2P1Q5T6R2 138 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 TMPRSS11AQ6ZMR5 421 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 SNX20Q7Z614 316 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 CBLN2Q8IUK8 224 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 ZNF695Q8IW36 515 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 TMEM183AQ8IXX5 376 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 VKORC1L1Q8N0U8 176 aa1.76□□□□□ -2.13
ATM-230ENST00000640388 NPWQ8N729 165 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms