RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
PTPRVP-204ENST00000639439 HILPDAQ9Y5L2 63 aa12.54□□□□□ -0.4
PTPRVP-204ENST00000639439 ODAMA1E959 279 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 DEGS1O15121 323 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 CD2P06729 351 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 LIMS3P0CW19 117 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 LIMS4P0CW20 117 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 CDK2P24941 298 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 DCKP27707 260 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 ARHGDIBP52566 201 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 SCN1BQ07699 218 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 AESQ08117 197 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 Q6P435 159 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 RPL22L1Q6P5R6 122 aaKnown RBP12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 GPR148Q8TDV2 347 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 STMN2Q93045 179 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 ZNF702PQ9H963 129 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 FOXJ3Q9UPW0 622 aa12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
PTPRVP-204ENST00000639439 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 FAM90A22PA8MWA6 464 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 MMP23AO75900 390 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 ALDOBP05062 364 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 VSIG10L2P0DP72 767 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 CD34P28906 385 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 PTGFRP43088 359 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 GLIPR1P48060 266 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 BDH1Q02338 343 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 PRAMEF5Q5TYX0 476 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 ZNF529Q6P280 563 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 OR4D6Q8NGJ1 314 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 GPER1Q99527 375 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 OR6C3Q9NZP0 311 aa12.52□□□□□ -0.41
PTPRVP-204ENST00000639439 ZNF729A6NN14 1252 aaPredicted RBP12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 WBP4O75554 376 aaKnown RBP12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 BRS3P32247 399 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 CDK5R1Q15078 307 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 C16orf82Q7Z2V1 217 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 TNFAIP8L1Q8WVP5 186 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 COQ2Q96H96 371 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 NCOR1P1Q9H4R4 102 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 SERTAD4Q9NUC0 356 aa12.51□□□□□ -0.41
PTPRVP-204ENST00000639439 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 H0YJX3 145 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 TOR1AO14656 332 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 PEX14O75381 377 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 MYL12AP19105 171 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 CEACAM3P40198 252 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 SOX2P48431 317 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 PRRX1P54821 245 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 MED21Q13503 144 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 ATXN7L3Q14CW9 347 aaPredicted RBP12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 SMN1Q16637 294 aaKnown RBP12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 SATL1Q86VE3 508 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 ZNF565Q8N9K5 539 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 Q8NFD4 153 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 OR51T1Q8NGJ9 327 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 BARHL1Q9BZE3 327 aa12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 EXOSC1Q9Y3B2 195 aaKnown RBP12.5□□□□□ -0.41
PTPRVP-204ENST00000639439 A0A087X0M5 115 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 KBTBD11-OT1A0A1B0GTJ5 212 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 A0A1B0GX30 115 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 GABRPO00591 440 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 FBXO24O75426 580 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 OPN1MWP04001 364 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 OPN1MW2P0DN77 364 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 OPN1MW3P0DN78 364 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 KCNJ3P48549 501 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 ETV1P50549 477 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 PPP3R1P63098 170 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 EMX1Q04741 257 aaPredicted RBP12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 HABP2Q14520 560 aaPredicted RBP12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 RSU1Q15404 277 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 PAN3Q58A45 887 aaKnown RBP12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 ARSJQ5FYB0 599 aaPredicted RBP12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 PACRGLQ8N7B6 248 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 SETD9Q8NE22 299 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
PTPRVP-204ENST00000639439 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms