RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 SARAFQ96BY9 339 aa6.74□□□□□ -1.33
GABRB3-225ENST00000638099 CPNE2Q96FN4 548 aaPredicted RBP6.74□□□□□ -1.33
GABRB3-225ENST00000638099 CXorf58Q96LI9 332 aa6.74□□□□□ -1.33
GABRB3-225ENST00000638099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.74□□□□□ -1.33
GABRB3-225ENST00000638099 UFSP2Q9NUQ7 469 aa6.74□□□□□ -1.33
GABRB3-225ENST00000638099 COMMD9Q9P000 198 aa6.74□□□□□ -1.33
GABRB3-225ENST00000638099 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
GABRB3-225ENST00000638099 RPS10-NUDT3A0A1W2PQS6 291 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 LEUTXA8MZ59 168 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 H0YIZ8 118 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 SIRPB1O00241 398 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 SLC33A1O00400 549 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 AQP7O14520 342 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 SFT2D2O95562 160 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 COX5BP10606 129 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RCC1P18754 421 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 PIGPP57054 158 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 S100A10P60903 97 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 TGFBR3Q03167 851 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 PSG7Q13046 419 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 ACTBL2Q562R1 376 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 ZNF660Q6AZW8 331 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 C11orf87Q6NUJ2 197 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 CLEC9AQ6UXN8 241 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 Q6ZT83 130 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 PEG10Q86TG7 708 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 WDR31Q8NA23 367 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 SNIP1Q8TAD8 396 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 VRK1Q99986 396 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 NCOR1P1Q9H4R4 102 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 ESRP2Q9H6T0 727 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 OR5AC2Q9NZP5 309 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 OR14J1Q9UGF5 321 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 LHX6Q9UPM6 363 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 C14orf166Q9Y224 244 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 KLF2Q9Y5W3 355 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 COL6A6A6NMZ7 2263 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 WNT9BO14905 357 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 TNFSF12O43508 249 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RP2O75695 350 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 TNFSF13O75888 250 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 SNAPINO95295 136 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 CST4P01036 141 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 ZNF44P15621 663 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 AADACP22760 399 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 UCP2P55851 309 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 DHODHQ02127 395 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RTP5Q14D33 572 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 ZMYND11Q15326 602 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 MPPED2Q15777 294 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RTL6Q6ICC9 239 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 FAM53AQ6NSI3 398 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 VHLLQ6RSH7 139 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 GSG1LQ6UXU4 331 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 MKXQ8IYA7 352 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 GTF3AQ92664 365 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 STARD4Q96DR4 205 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RRNAD1Q96FB5 475 aaKnown RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 MYOZ1Q9NP98 299 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-225ENST00000638099 HSF4Q9ULV5 492 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 MAB21L2Q9Y586 359 aa6.73□□□□□ -1.33
GABRB3-225ENST00000638099 RNF222A6NCQ9 220 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 MSGN1A6NI15 193 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 DBX1A6NMT0 343 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 GATCO43716 136 aaKnown RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 IFNA7P01567 189 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 CECR9P0C854 216 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 ZNF728P0DKX0 622 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 HOXC12P31275 282 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 LUMP51884 338 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 C22orf34Q6ZV56 151 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 SUMF2Q8NBJ7 301 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 OR5A2Q8NGI9 324 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 KLF14Q8TD94 323 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 SECTM1Q8WVN6 248 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 IL1F10Q8WWZ1 152 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 DCUN1D4Q92564 292 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 MRPL24Q96A35 216 aaKnown RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 ADAT1Q9BUB4 502 aaKnown RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 OBP2BQ9NPH6 170 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 NECAP2Q9NVZ3 263 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 HMSDA8MTL9 139 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 CEACAM4O75871 244 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 NXPH3O95157 252 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 CD8AP01732 235 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 OR5AC1P0C628 307 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 ZNF250P15622 560 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 ZNF83P51522 516 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 FGF12P61328 243 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 RAB32Q13637 225 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 HERPUD1Q15011 391 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 GUSBP1Q15486 140 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 PRR30Q53SZ7 412 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 PRAMEF6Q5VXH4 476 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 MEX3BQ6ZN04 569 aaKnown RBP6.72□□□□□ -1.33
GABRB3-225ENST00000638099 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
GABRB3-225ENST00000638099 SCCPDHQ8NBX0 429 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms