RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TMPRSS3P57727 454 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 TMEM18Q96B42 140 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 TSPAN32Q96QS1 320 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 CYB5R3P00387 301 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 WDR38Q5JTN6 314 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 PMS2CLQ68D20 193 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 NTMQ9P121 344 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 MBD1Q9UIS9 605 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 IFITM5A6NNB3 132 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 FPR2P25090 351 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 NMUP48645 174 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 LRRC75AQ8NAA5 344 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 MYOZ3Q8TDC0 251 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 OIT3Q8WWZ8 545 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 ZNF426Q9BUY5 554 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 YAE1D1Q9NRH1 226 aa15.76■□□□□ 0.11
CACNA1A-227ENST00000636549 SS18L1O75177 396 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 RECKO95980 971 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 VSIG10L2P0DP72 767 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 LEAP2Q969E1 77 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 NTNG2Q96CW9 530 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 PRDM6Q9NQX0 595 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 BET1LQ9NYM9 111 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 AMDHD2Q9Y303 409 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 IGKV3D-20A0A0C4DH25 116 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 LINC01560Q8TB33 94 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 PRB4P10163 310 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 EPHA8P29322 1005 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 SPCS3P61009 180 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 PSG6Q00889 435 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 ZCCHC14Q8WYQ9 949 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 FLRT3Q9NZU0 649 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 DHRS7CA6NNS2 312 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 C16orf97H3BN30 126 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 CTSVO60911 334 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 IGFBP7Q16270 282 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 PIGYQ3MUY2 71 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 DEFB121Q5J5C9 76 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 SLC26A10Q8NG04 563 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 H3BTX0 84 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 CCL3P10147 92 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 COL8A1P27658 744 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 C11orf91Q3C1V1 193 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 NSUN5P1Q3KNT7 163 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 FAM26EQ8N5C1 309 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 TP53I13Q8NBR0 393 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 RAB37Q96AX2 223 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 SMIM19Q96E16 107 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 NPAS1Q99742 590 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 GSX1Q9H4S2 264 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 SLC25A37Q9NYZ2 338 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 WNT16Q9UBV4 365 aa15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 TBL2Q9Y4P3 447 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-227ENST00000636549 EPPINO95925 133 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 C1QL3Q5VWW1 255 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 FUNDC1Q8IVP5 155 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 DND1Q8IYX4 353 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 SGK494Q96LW2 274 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 IGHV5-10-1A0A0J9YXX1 117 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 HERVK_113P61574 105 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 GHITMQ9H3K2 345 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 SLC17A2O00624 439 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 P01737 135 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 CRISP2P16562 243 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 LINC00303Q3SY05 128 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 DDB2Q92466 427 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 A0A0A6YYD5 115 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 C10orf113Q5VZT2 155 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 OR2A5Q96R48 311 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 IGHV3-48P01763 117 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 ZNF665Q9H7R5 613 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 CCL27Q9Y4X3 112 aa15.74■□□□□ 0.11
CACNA1A-227ENST00000636549 CT62P0C5K7 136 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 COMPP49747 757 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 SKP2Q13309 424 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 FAM53BQ14153 422 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 BEX4Q9NWD9 120 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 RNF7Q9UBF6 113 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 SLX4Q8IY92 1834 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 TAAR5O14804 337 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 RSPO4Q2I0M5 234 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 RNF165Q6ZSG1 346 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 NUFIP2Q7Z417 695 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 NEU1Q99519 415 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 NAA60Q9H7X0 242 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 GLRX2Q9NS18 164 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 SPNP16150 400 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 FUT7Q11130 342 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 TGIF1Q15583 401 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 DLEU7Q6UYE1 221 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 SH2D2AQ9NP31 389 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 IGLV3-10A0A075B6K4 115 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 GABRA1P14867 456 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 LTBRP36941 435 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 SSX8Q7RTT4 187 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 PITPNC1Q9UKF7 332 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 THY1P04216 161 aa15.73■□□□□ 0.11
CACNA1A-227ENST00000636549 ADRB1P08588 477 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms