RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SOX14O95416 240 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 LY6G6CO95867 125 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 TTRP02766 147 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 VDAC1P21796 283 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 NFYBP25208 207 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 PTGFRP43088 359 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 HMGA2P52926 109 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 ZNF146Q15072 292 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 DEGS2Q6QHC5 323 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 Q8N6K4 173 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 EAF1Q96JC9 268 aaPredicted RBP14.01□□□□□ -0.17
CLN6-212ENST00000636020 KCTD7Q96MP8 289 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 OR5B12Q96R08 314 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 TAGLN3Q9UI15 199 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 VSIG4Q9Y279 399 aa14.01□□□□□ -0.17
CLN6-212ENST00000636020 ABCA13Q86UQ4 5058 aa14□□□□□ -0.17
CLN6-212ENST00000636020 FUOMA2VDF0 154 aa14□□□□□ -0.17
CLN6-212ENST00000636020 COX4I1P13073 169 aa14□□□□□ -0.17
CLN6-212ENST00000636020 CNTFRP26992 372 aa14□□□□□ -0.17
CLN6-212ENST00000636020 ISL1P61371 349 aa14□□□□□ -0.17
CLN6-212ENST00000636020 AESQ08117 197 aa14□□□□□ -0.17
CLN6-212ENST00000636020 MADCAM1Q13477 382 aa14□□□□□ -0.17
CLN6-212ENST00000636020 C17orf58Q2M2W7 97 aa14□□□□□ -0.17
CLN6-212ENST00000636020 SLC25A26Q70HW3 274 aa14□□□□□ -0.17
CLN6-212ENST00000636020 CATSPERDQ86XM0 798 aa14□□□□□ -0.17
CLN6-212ENST00000636020 OR14K1Q8NGZ2 314 aa14□□□□□ -0.17
CLN6-212ENST00000636020 NSL1Q96IY1 281 aa14□□□□□ -0.17
CLN6-212ENST00000636020 KIRREL1Q96J84 757 aa14□□□□□ -0.17
CLN6-212ENST00000636020 IL1RAPQ9NPH3 570 aa14□□□□□ -0.17
CLN6-212ENST00000636020 KIAA1456Q9P272 454 aa14□□□□□ -0.17
CLN6-212ENST00000636020 MPZL2O60487 215 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 ENTPD6O75354 484 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 CALB2P22676 271 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 KIR3DL2P43630 455 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 HCCSP53701 268 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 CDC42P60953 191 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 Q6ZSR3 168 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 GATAD1Q8WUU5 269 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 EME1Q96AY2 570 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 HSPB9Q9BQS6 159 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 PLSCR3Q9NRY6 295 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 RBFOX1Q9NWB1 397 aaKnown RBP13.99□□□□□ -0.17
CLN6-212ENST00000636020 LAMP5Q9UJQ1 280 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 ZNF580Q9UK33 172 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 VPS13DQ5THJ4 4388 aa13.99□□□□□ -0.17
CLN6-212ENST00000636020 A0A1B0GTI1 187 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 ODAMA1E959 279 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 ZNF729A6NN14 1252 aaPredicted RBP13.98□□□□□ -0.17
CLN6-212ENST00000636020 SIRPB1O00241 398 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 HSPA12AO43301 675 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 IGHV3-7P01780 117 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 IGF1P05019 195 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 FABP3P05413 133 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 NPBWR2P48146 333 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 SLURP1P55000 103 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 MFGE8Q08431 387 aaPredicted RBP13.98□□□□□ -0.17
CLN6-212ENST00000636020 Q8IYB0 196 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 FAM58AQ8N1B3 248 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 HAVCR2Q8TDQ0 301 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 ARPC1AQ92747 370 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 LEAP2Q969E1 77 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 MCUR1Q96AQ8 359 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
CLN6-212ENST00000636020 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 OR51J1Q9H342 316 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 GORASP2Q9H8Y8 452 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 CHCHD3Q9NX63 227 aaKnown RBP13.98□□□□□ -0.17
CLN6-212ENST00000636020 ABCD2Q9UBJ2 740 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 PSG11Q9UQ72 335 aa13.98□□□□□ -0.17
CLN6-212ENST00000636020 TRBV2A0A0J9YWF9 115 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 KBTBD11-OT1A0A1B0GTJ5 212 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 DHRS7CA6NNS2 312 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 ATP5HO75947 161 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 KRT36O76013 467 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 OR8U9P0C7N5 309 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 ZP1P60852 638 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 UBE2V2Q15819 145 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 TMEM65Q6PI78 240 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 MROQ9BYG7 248 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 RETNQ9HD89 108 aa13.97□□□□□ -0.17
CLN6-212ENST00000636020 IGHV3-72A0A0B4J1Y9 119 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 PRR32B1ATL7 298 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 ZNF254O75437 659 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 OR5H8P0DN80 308 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 CGB3P0DN86 165 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 CGB7P0DN87 165 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 CALCBP10092 127 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 ARSBP15848 533 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
CLN6-212ENST00000636020 SNU13P55769 128 aaKnown RBP13.96□□□□□ -0.17
CLN6-212ENST00000636020 ROM1Q03395 351 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 ZNF829Q3KNS6 432 aaPredicted RBP13.96□□□□□ -0.17
CLN6-212ENST00000636020 SPIN3Q5JUX0 258 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 MOB3BQ86TA1 216 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 IZUMO1Q8IYV9 350 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 ZNF679Q8IYX0 411 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 IQCF1Q8N6M8 205 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 AQP11Q8NBQ7 271 aa13.96□□□□□ -0.17
CLN6-212ENST00000636020 OR2T10Q8NGZ9 312 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms