RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 Q8N7P7 452 aa12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 OR4M1Q8NGD0 313 aa12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 NR1H4Q96RI1 486 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 SUCNR1Q9BXA5 334 aa12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF69Q9UC07 566 aa12.12□□□□□ -0.47
CDC42BPB-209ENST00000634889 A0A087WXM4 84 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 hADV38S2A0JD32 116 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 SLC22A1O15245 554 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 TCF21O43680 179 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 RBP4P02753 201 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 PRTN3P24158 256 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 RANBP1P43487 201 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 KCNJ3P48549 501 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 P2RX3P56373 397 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 PAX5Q02548 391 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 NCR3LG1Q68D85 454 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 OR6M1Q8NGM8 313 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 LHX4Q969G2 390 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 CST11Q9H112 138 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 PPA2Q9H2U2 334 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF696Q9H7X3 374 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
CDC42BPB-209ENST00000634889 DSCAML1Q8TD84 2053 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 TRAV1-2A0A0B4J238 106 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 IGHV1-69DA0A0B4J2H0 117 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A10PA6NDY2 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A18PA6NE21 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A16PA6NEW6 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A20PA6NIJ5 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A8PA6NJQ4 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A7PA6NKC0 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 C17orf98A8MV24 154 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A22PA8MWA6 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A12PA8MX19 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A5PA8MXJ8 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A23PA8MXZ1 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 IGHV1-69P01742 117 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A15PP0C7V4 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A13PP0C7W8 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A14PP0C7W9 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FAM90A24PP0C7X0 464 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 HTR2CP28335 458 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 FGF9P31371 208 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 PSMD7P51665 324 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF273Q14593 569 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 NEDD8Q15843 81 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 SLC6A7Q99884 636 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 SIRT7Q9NRC8 400 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 UBE2J1Q9Y385 318 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPB-209ENST00000634889 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 A0A1W2PP11 408 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 H3BUI4 141 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 PDCD5O14737 125 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF728P0DKX0 622 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 MGMTP16455 207 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 CCL3L1P16619 93 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 MYL9P24844 172 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 DLX6P56179 175 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 HILS1P60008 231 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 PAN3Q58A45 887 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 C11orf42Q8N5U0 333 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 C22orf15Q8WYQ4 148 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 TNFRSF14Q92956 283 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 JMJD8Q96S16 334 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 GFI1Q99684 422 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 NCOR1P1Q9H4R4 102 aa12.09□□□□□ -0.47
CDC42BPB-209ENST00000634889 JMJD1CQ15652 2540 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 TRGV10A0A0A0MS01 117 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 RNASEK-C17orf49H0YIS7 233 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 SLC17A2O00624 439 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 HSPB6O14558 160 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 CRTAPO75718 401 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 BPNT1O95861 308 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 CFPP27918 469 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 UBE2E1P51965 193 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 ERVFRD-1P60508 538 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 AESQ08117 197 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 ATXN7L3Q14CW9 347 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 KRBOX4Q5JUW0 171 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 C22orf42Q6IC83 251 aa12.08□□□□□ -0.48
CDC42BPB-209ENST00000634889 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms