RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	EIF3I	Q13347	325 aa	Known RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	LDLRAD2	Q5SZI1	272 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	MUC20	Q8N307	709 aa	Predicted RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	SGMS2	Q8NHU3	365 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	LSM10	Q969L4	123 aa	Known RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	USP3	Q9Y6I4	520 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	COL2A1	P02458	1487 aa	Predicted RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	PQLC2L	A1A4F0	135 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	HYAL3	O43820	417 aa	Predicted RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	EIF1	P41567	113 aa	Known RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	CYB561	P49447	251 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	CLDN10	P78369	228 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	PDCD1	Q15116	288 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	STAC2	Q6ZMT1	411 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	PTRH1	Q86Y79	214 aa	Known RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	TMEM99	Q8N816	258 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	C19orf53	Q9UNZ5	99 aa	Predicted RBP	10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	HS3ST2	Q9Y278	367 aa		10.14	□□□□□ -0.79
SRSF4-208	ENST00000634348	CST5	P28325	142 aa	Predicted RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	C1orf140	Q5VVS0	124 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	A4GALT	Q9NPC4	353 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	APOM	O95445	188 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	TIMD4	Q96H15	378 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	GML	Q99445	158 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	MS4A8	Q9BY19	250 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	ALX4	Q9H161	411 aa	Predicted RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	FAM208A	Q9UK61	1670 aa	Known RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SBK3	P0C264	359 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	ZNF441	Q8N8Z8	693 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	WFDC5	Q8TCV5	224 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	PARL	Q9H300	379 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	KLKB1	P03952	638 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	IGFBP7	Q16270	282 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	MEIG1	Q5JSS6	88 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	WFDC8	Q8IUA0	241 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SNRNP40	Q96DI7	357 aa	Known RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	HSD17B10	Q99714	261 aa	Known RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	NPIPB8	E9PQR5	432 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	NPIPB9	F8W1W9	429 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	NPIPB7	O75200	414 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	FBLN7	Q53RD9	439 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	FAM71F2	Q6NXP2	309 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SLC37A2	Q8TED4	501 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	OR8B2	Q96RD0	313 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	IGKV6D-21	A0A0A0MT36	114 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	OTX1	P32242	354 aa	Predicted RBP	10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SPANXN1	Q5VSR9	72 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SLC36A1	Q7Z2H8	476 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	HES7	Q9BYE0	225 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	WNT5B	Q9H1J7	359 aa		10.13	□□□□□ -0.79
SRSF4-208	ENST00000634348	SERTM1	A2A2V5	107 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	C7orf71	A4D174	169 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PLPP1	O14494	284 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	MFAP2	P55001	183 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	TMEM204	Q9BSN7	226 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	CACNG5	Q9UF02	275 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	RGPD8	O14715	1765 aa	Predicted RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	KCP	Q6ZWJ8	1503 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348		M0R1B8	84 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	SFT2D2	O95562	160 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PFN3	P60673	137 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PDLIM7	Q9NR12	457 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	SETD1A	O15047	1707 aa	Known RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	RIMBP3C	A6NJZ7	1639 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	RIMBP3B	A6NNM3	1639 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	RIMBP3	Q9UFD9	1639 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	FAM157C	P0CG43	387 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ORM2	P19652	201 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ACVR1	Q04771	509 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ZNF273	Q14593	569 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	TMEM65	Q6PI78	240 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	LIAT1	Q6ZQX7	453 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PAQR9	Q6ZVX9	377 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	HS3ST3A1	Q9Y663	406 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PMEL	P40967	661 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PPIA	P62937	165 aa	Known RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	HFE	Q30201	348 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	VMA21	Q3ZAQ7	101 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	NEU1	Q99519	415 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	MAP1LC3A	Q9H492	121 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PARP11	Q9NR21	331 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ZMIZ1	Q9ULJ6	1067 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ACSM5	Q6NUN0	579 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	C17orf99	Q6UX52	265 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	GBGT1	Q8N5D6	347 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	PSG5	Q15238	335 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	SP6	Q3SY56	376 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	EMC4	Q5J8M3	183 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	CXorf67	Q86X51	503 aa	Predicted RBP	10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	MARVELD1	Q9BSK0	173 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	MED29	Q9NX70	200 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	NEURL4	Q96JN8	1562 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	CXorf1	O96002	111 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	ADRA2A	P08913	450 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	SPINK2	P20155	84 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	DLEU7	Q6UYE1	221 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	OVCH2	Q7RTZ1	564 aa		10.12	□□□□□ -0.79
SRSF4-208	ENST00000634348	GSTZ1	O43708	216 aa	Predicted RBP	10.11	□□□□□ -0.79

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