RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CFDP00746 253 aaPredicted RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 CECR9P0C854 216 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 PGA5P0DJD9 388 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 PRKACAP17612 351 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 PI3P19957 117 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 LMO1P25800 156 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 RBMXP38159 391 aaKnown RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 MDH2P40926 338 aaKnown RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 GLP1RP43220 463 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 KIR2DS4P43632 304 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 KCNJ3P48549 501 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 RAB14P61106 215 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 RND3P61587 244 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 MZT1Q08AG7 82 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 EXOSC2Q13868 293 aaKnown RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 TMEM187Q14656 261 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 KIR2DS1Q14954 304 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 ZNF146Q15072 292 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 OR8G1Q15617 311 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 TSC22D1Q15714 1073 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 TBR1Q16650 682 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 ALKBH6Q3KRA9 238 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 ESCO2Q56NI9 601 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 SPATA46Q5T0L3 261 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 ZNF474Q6S9Z5 364 aaPredicted RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 Q6ZPA2 131 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 WDR86Q86TI4 376 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 LDLRAD3Q86YD5 345 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 C11orf53Q8IXP5 236 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 FAM185AQ8N0U4 392 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 SUMF2Q8NBJ7 301 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 POC1AQ8NBT0 407 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 BHLHE23Q8NDY6 225 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 THAP6Q8TBB0 222 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 NRIP2Q9BQI9 281 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 SFXN3Q9BWM7 321 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 SUCNR1Q9BXA5 334 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 ARL6Q9H0F7 186 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 FXYD6Q9H0Q3 95 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 TLNRD1Q9H1K6 362 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 OPN3Q9H1Y3 402 aaPredicted RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 CXXC4Q9H2H0 198 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 OR51B6Q9H340 312 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 NAA60Q9H7X0 242 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 METTL8Q9H825 291 aaKnown RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 HES4Q9HCC6 221 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 CHMP1AQ9HD42 196 aaPredicted RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 MED9Q9NWA0 146 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 C1orf123Q9NWV4 160 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 DNAJB11Q9UBS4 358 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 KIF25Q9UIL4 384 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 MSRB2Q9Y3D2 182 aa4.73□□□□□ -1.65
NEK3-211ENST00000629912 PTPRZ1P23471 2315 aaPredicted RBP4.73□□□□□ -1.65
NEK3-211ENST00000629912 SVILO95425 2214 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 IGHV2OR16-5A0A0B4J2B6 119 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 TEX13DA0A0J9YY54 714 aaPredicted RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 C13orf42A0A1B0GVH6 325 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RPS10-NUDT3A0A1W2PQS6 291 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ANKRD34BA5PLL1 514 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 A8MXE2 369 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 FAM25EA8MYX2 175 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 EEF1E1-BLOC1S5C9J1V9 151 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 NPIPB11E5RHQ5 1161 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 CCSO14618 274 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SH2D1BO14796 132 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 MPPED1O15442 326 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RP2O75695 350 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 RHBDL1O75783 438 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 DIRAS3O95661 229 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PTBP3O95758 552 aaKnown RBP4.72□□□□□ -1.65
NEK3-211ENST00000629912 KNG1P01042 644 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PPYP01298 95 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 IFNA21P01568 189 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 TK1P04183 234 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 WNT2P09544 360 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SCTP09683 121 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 GLI4P10075 376 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ZNF250P15622 560 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 AADACP22760 399 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 GCH1P30793 250 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 GNRHRP30968 328 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 GLRXP35754 106 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 CFHR2P36980 270 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 MPV17P39210 176 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 TDGF1P3P51864 188 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PIGPP57054 158 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ERVS71-1P61550 626 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 HERV-K104P61576 105 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 FOXC1Q12948 553 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ZNF154Q13106 437 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 BAMBIQ13145 260 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SLC9A3R2Q15599 337 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 ABCA11PQ4W5N1 156 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 IGSF11Q5DX21 431 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 SPIN3Q5JUX0 258 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PRSS54Q6PEW0 395 aa4.72□□□□□ -1.65
NEK3-211ENST00000629912 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms