RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 DNAAF1Q8NEP3 725 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 OR9G1Q8NH87 305 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 CANT1Q8WVQ1 401 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 C10orf35Q96D05 121 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 HMG20AQ9NP66 347 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 ING3Q9NXR8 418 aa12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
PDLIM3-213ENST00000629667 ODAMA1E959 279 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 ZNF729A6NN14 1252 aaPredicted RBP12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 FGF16O43320 207 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 ZNF44P15621 663 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 ECI1P42126 302 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 SCN1BQ07699 218 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 PTGES3Q15185 160 aaKnown RBP12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 KRBOX4Q5JUW0 171 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 C9orf66Q5T8R8 295 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 OR5M8Q8NGP6 311 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 DNAJC9Q8WXX5 260 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 TBX5Q99593 518 aa12.33□□□□□ -0.44
PDLIM3-213ENST00000629667 HOXB6P17509 224 aaKnown RBP12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 BNIP1Q12981 228 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 PDZK1IP1Q13113 114 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 HNF4GQ14541 408 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 UTF1Q5T230 341 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 TEX38Q6PEX7 206 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 STPG2Q8N412 459 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 DRAM1Q8N682 238 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 TCEANCQ8N8B7 351 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 NSL1Q96IY1 281 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 HRASLS5Q96KN8 279 aa12.32□□□□□ -0.44
PDLIM3-213ENST00000629667 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 AQP12BA6NM10 295 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 M0R129 80 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 IGHG2P01859 326 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 CSN2P05814 226 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 OCM2P0CE71 109 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 PRKACBP22694 351 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 C17orf58Q2M2W7 97 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 DEFB136Q30KP8 78 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 CASC10Q5T4H9 136 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 AADACL4Q5VUY2 407 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 AQP12AQ8IXF9 295 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 OR8U1Q8NH10 309 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 RFT1Q96AA3 541 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 COQ2Q96H96 371 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 KIRREL1Q96J84 757 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 COMMD4Q9H0A8 199 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 DCLRE1BQ9H816 532 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 OR6C3Q9NZP0 311 aa12.31□□□□□ -0.44
PDLIM3-213ENST00000629667 DYNC2H1Q8NCM8 4307 aaKnown RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 RYR2Q92736 4967 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 KBTBD11-OT1A0A1B0GTJ5 212 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 A0A1W2PPI3 338 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 A0A1W2PQL4 384 aaPredicted RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 SEC14L6B5MCN3 397 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 J3QR06 171 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 FAM107AO95990 144 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 IGHV3-7P01780 117 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 UBCP0CG48 685 aaKnown RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 ATF1P18846 271 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 CHATP28329 748 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 RAB7AP51149 207 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 ATXN7L3Q14CW9 347 aaPredicted RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 GID4Q8IVV7 300 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 CHST4Q8NCG5 386 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 Q8NFD4 153 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 TMEM163Q8TC26 289 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 ADAT3Q96EY9 351 aaPredicted RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 OPALINQ96PE5 141 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
PDLIM3-213ENST00000629667 STAB2Q8WWQ8 2551 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 IGKV1-12A0A0C4DH73 117 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 AP4M1O00189 453 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 SLC33A1O00400 549 aaPredicted RBP12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 SULT1C4O75897 302 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 IGKV1D-12P01611 117 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 OR2T7P0C7T2 308 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 ZNF20P17024 532 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 PNLIPRP3Q17RR3 467 aa12.29□□□□□ -0.44
PDLIM3-213ENST00000629667 CXorf66Q5JRM2 361 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms