RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SEBOXQ9HB31 216 aaPredicted RBP11.54□□□□□ -0.56
PNKP-218ENST00000625299 SLC25A19Q9HC21 320 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 PCDHB16Q9NRJ7 776 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 SCOCQ9UIL1 159 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
PNKP-218ENST00000625299 SMAD5-AS1Q9Y6J3 95 aa11.54□□□□□ -0.56
PNKP-218ENST00000625299 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A18PA6NE21 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A16PA6NEW6 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A20PA6NIJ5 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 LINC01548A6NM66 108 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A9PA6NNJ1 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A12PA8MX19 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A5PA8MXJ8 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FGF16O43320 207 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 IGKV1D-33P01593 117 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 IGKV1-33P01594 117 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 IGHG2P01859 326 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A15PP0C7V4 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A13PP0C7W8 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A14PP0C7W9 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 FAM90A24PP0C7X0 464 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 RAP2AP10114 183 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 ZNF44P15621 663 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 PRKACGP22612 351 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 RBP2P50120 134 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 ATP1B3P54709 279 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 BNIP1Q12981 228 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 ATXN7L3Q14CW9 347 aaPredicted RBP11.53□□□□□ -0.56
PNKP-218ENST00000625299 CXorf66Q5JRM2 361 aaPredicted RBP11.53□□□□□ -0.56
PNKP-218ENST00000625299 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 Q6ZSR3 168 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 OVCH2Q7RTZ1 564 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 OR9G1Q8NH87 305 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 RFT1Q96AA3 541 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 TBX5Q99593 518 aa11.53□□□□□ -0.56
PNKP-218ENST00000625299 A0A087X0M5 115 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 A0A1B0GX30 115 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 ZNF729A6NN14 1252 aaPredicted RBP11.52□□□□□ -0.57
PNKP-218ENST00000625299 KRT8P05787 483 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 GLP1RP43220 463 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 GNG10P50151 68 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 MTCP1P56278 107 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 MS4A2Q01362 244 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 DIAPH2-AS1Q14236 149 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 LTC4SQ16873 150 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 PNLIPRP3Q17RR3 467 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 MEPCEQ7L2J0 689 aaKnown RBP11.52□□□□□ -0.57
PNKP-218ENST00000625299 CATSPERDQ86XM0 798 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 KIRREL1Q96J84 757 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 LRGUKQ96M69 825 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 ADGRL4Q9HBW9 690 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
PNKP-218ENST00000625299 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 NCBP2LA6PVI3 153 aaKnown RBP11.51□□□□□ -0.57
PNKP-218ENST00000625299 J3QR06 171 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 M0R129 80 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 AP4M1O00189 453 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 PRKYO43930 277 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 SNX3O60493 162 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 OCM2P0CE71 109 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 OCMP0CE72 109 aaPredicted RBP11.51□□□□□ -0.57
PNKP-218ENST00000625299 MNAT1P51948 309 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 MADCAM1Q13477 382 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 GPR50Q13585 617 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 KIR2DS1Q14954 304 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 COQ2Q96H96 371 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 MNTQ99583 582 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 PPIL3Q9H2H8 161 aaKnown RBP11.51□□□□□ -0.57
PNKP-218ENST00000625299 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
PNKP-218ENST00000625299 SORL1Q92673 2214 aa11.51□□□□□ -0.57
PNKP-218ENST00000625299 LOC107986453A0A1B0GWG9 222 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 HSPB6O14558 160 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 ANXA8P13928 327 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 GPR12P47775 334 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
PNKP-218ENST00000625299 RAB7AP51149 207 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 TRIM25Q14258 630 aaKnown RBP11.5□□□□□ -0.57
PNKP-218ENST00000625299 OR5D18Q8NGL1 313 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 PP6455Q8WZ26 134 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
PNKP-218ENST00000625299 GON7Q9BXV9 100 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 ZMAT4Q9H898 229 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 NEK6Q9HC98 313 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 OR6C3Q9NZP0 311 aa11.5□□□□□ -0.57
PNKP-218ENST00000625299 IGHV3-72A0A0B4J1Y9 119 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 IGKV1-9A0A0C4DH69 117 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 CRISP1P54107 249 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 FOXE3Q13461 319 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 LHFPL2Q6ZUX7 228 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
PNKP-218ENST00000625299 ADGRG5Q8IZF4 528 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms