RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RAB22AQ9UL26 194 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 ANK2Q01484 3957 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 TMEM210A6NLX4 147 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 CRTAPO75718 401 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 SFTPBP07988 381 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 MGMTP16455 207 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 MPZP25189 248 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 PTBP1P26599 531 aaKnown RBP eCLIP10.5□□□□□ -0.73
PNKP-217ENST00000625216 CD80P33681 288 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 MNDAP41218 407 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 RPS27AP62979 156 aaKnown RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 TUSC1Q2TAM9 212 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 C11orf91Q3C1V1 193 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 PYDC2Q56P42 97 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 FAM76BQ5HYJ3 339 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 CD276Q5ZPR3 534 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 WDR25Q64LD2 544 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 BAIAP2L2Q6UXY1 529 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 ZNF573Q86YE8 665 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 SAXO1Q8IYX7 474 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 ZSCAN4Q8NAM6 433 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 KCNG3Q8TAE7 436 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 AQP3Q92482 292 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 GCDHQ92947 438 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 DACT3Q96B18 629 aaPredicted RBP10.5□□□□□ -0.73
PNKP-217ENST00000625216 ABHD1Q96SE0 405 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 SLC6A7Q99884 636 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 PKIBQ9C010 78 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 ATG5Q9H1Y0 275 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 C1orf123Q9NWV4 160 aa10.5□□□□□ -0.73
PNKP-217ENST00000625216 A6NLC8 198 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 RAB27BO00194 218 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 RHBDL1O75783 438 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 HTR3BO95264 441 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 LHBP01229 141 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 LIPFP07098 398 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 GRPP07492 148 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 PTHLHP12272 177 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 BCL3P20749 454 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 RANBP1P43487 201 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 NPBWR2P48146 333 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 IL24Q13007 206 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 RSU1Q15404 277 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 BAK1Q16611 211 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 TMEM69Q5SWH9 247 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 PYHIN1Q6K0P9 492 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 ZNF841Q6ZN19 808 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 GDPD1Q8N9F7 314 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 SCCPDHQ8NBX0 429 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 UPRTQ96BW1 309 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
PNKP-217ENST00000625216 Q96M66 194 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 ZNF488Q96MN9 340 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 S100A13Q99584 98 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 TM2D1Q9BX74 207 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 CST11Q9H112 138 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 TLNRD1Q9H1K6 362 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 MTCH1Q9NZJ7 389 aa10.49□□□□□ -0.73
PNKP-217ENST00000625216 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 F8VVB4 439 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 F8VWA3 439 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 XRCC3O43542 346 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 UPK1BO75841 260 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 HLA-DQB1P01920 261 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 IL7P13232 177 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 CFHR2P36980 270 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 COMPP49747 757 aaPredicted RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 VEGFCP49767 419 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 BPIFB3P59826 476 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 DGCR2P98153 550 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 RNASE12Q5GAN4 147 aaKnown RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 KLF17Q5JT82 389 aaPredicted RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 C12orf54Q6X4T0 127 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 C9orf139Q6ZV77 190 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 C11orf53Q8IXP5 236 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 GCSAMQ8N6F7 178 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 Q8NFD4 153 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 NUDT16L1Q9BRJ7 211 aaKnown RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 URM1Q9BTM9 101 aaKnown RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 SELENOIQ9C0D9 397 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 AUNIPQ9H7T9 357 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 ABCB10Q9NRK6 738 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 RBFOX1Q9NWB1 397 aaKnown RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 ZNF581Q9P0T4 197 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 IL36RNQ9UBH0 155 aa10.48□□□□□ -0.73
PNKP-217ENST00000625216 MRPS7Q9Y2R9 242 aaKnown RBP10.48□□□□□ -0.73
PNKP-217ENST00000625216 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 A0A0A6YYH2 397 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 hCG_1807616A0A1W2PRN6 198 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 TMEM89A2RUT3 159 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 A6NJ64 397 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms