RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZNF100Q8IYN0 542 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 TMEM217Q8N7C4 229 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 FAM86C1Q9NVL1 165 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 EXPH5Q8NEV8 1989 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 LILRA5A6NI73 299 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 SHISA7A6NL88 538 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 TCAPO15273 167 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 MPPED1O15442 326 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 CYB5R3P00387 301 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 CEACAM1P13688 526 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 MDKP21741 143 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 BLKP51451 505 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 ZNF41P51814 821 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 HERV-K104P61576 105 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 TMEM183AQ8IXX5 376 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 GPR87Q9BY21 358 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 TMEM222Q9H0R3 208 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 CDH20Q9HBT6 801 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 TRBV24-1A0A075B6N3 115 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 TMEM50AO95807 157 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 OR8G1Q15617 311 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 PLPPR5Q32ZL2 321 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 OR1L3Q8NH93 324 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 MRGPRX4Q96LA9 322 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
LDB3-209ENST00000623056 CHRNA10Q9GZZ6 450 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 ZNF576Q9H609 170 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 ZNF286AQ9HBT8 521 aa12.22□□□□□ -0.45
LDB3-209ENST00000623056 CCDC163A0A0D9SF12 145 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 C10orf142B7Z368 130 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 AMBPP02760 352 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 PNLIPP16233 465 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 SRPXP78539 464 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 ZFP36L1Q07352 338 aaKnown RBP12.21□□□□□ -0.45
LDB3-209ENST00000623056 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
LDB3-209ENST00000623056 ZNF880Q6PDB4 577 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 DPPA3Q6W0C5 159 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 Q6ZSR3 168 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 C5orf24Q7Z6I8 188 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 OR4X1Q8NH49 305 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
LDB3-209ENST00000623056 OXGR1Q96P68 337 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 CABLES2Q9BTV7 478 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 NDUFAF3Q9BU61 184 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 KLRF1Q9NZS2 232 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 DKKL1Q9UK85 242 aa12.21□□□□□ -0.45
LDB3-209ENST00000623056 IGKV1-27A0A075B6S5 117 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 ADAM20O43506 726 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 MSR1P21757 451 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 RAB4BP61018 213 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 H3F3AP84243 136 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 ZNF154Q13106 437 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 PIGYQ3MUY2 71 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 KIAA0895LQ68EN5 471 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 TDHQ8IZJ6 230 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 GJC3Q8NFK1 279 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 C10orf35Q96D05 121 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 SPIN2AQ99865 258 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 SPIN2BQ9BPZ2 258 aa12.21□□□□□ -0.46
LDB3-209ENST00000623056 MED12Q93074 2177 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 RALGAPA1Q6GYQ0 2036 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 SLC33A1O00400 549 aaPredicted RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 ENDOGQ14249 297 aaKnown RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 Q6ZPA2 131 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 ZNF695Q8IW36 515 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 C17orf78Q8N4C9 275 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 IL22RA1Q8N6P7 574 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 RAB24Q969Q5 203 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 KLHDC7BQ96G42 594 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 TMEM56Q96MV1 263 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 WASF3Q9UPY6 502 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 UBE2J1Q9Y385 318 aaPredicted RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 PPYP01298 95 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 OPN1MWP04001 364 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 JMJD7P0C870 316 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 TAS2R30P59541 319 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 BAXQ07812 192 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 SELENOHQ8IZQ5 122 aaKnown RBP12.2□□□□□ -0.46
LDB3-209ENST00000623056 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 SPSB1Q96BD6 273 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
LDB3-209ENST00000623056 ATP5SQ99766 215 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms