RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NXPH2O95156 264 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 ZNF250P15622 560 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 S100GP29377 79 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 S100A11P31949 105 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 SRPXP78539 464 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 ZNF345Q14585 488 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 CISD2Q8N5K1 135 aaKnown RBP13.91□□□□□ -0.18
LDB3-208ENST00000623007 OR4A4PQ8NGN8 299 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 THAP6Q8TBB0 222 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 TMEM230Q96A57 120 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 GALNT14Q96FL9 552 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 WDR13Q9H1Z4 485 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 SEBOXQ9HB31 216 aaPredicted RBP13.91□□□□□ -0.18
LDB3-208ENST00000623007 HES4Q9HCC6 221 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 ZFP57Q9NU63 452 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 U3KQ87 197 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 IGKV1D-8A0A087WSZ0 117 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
LDB3-208ENST00000623007 TUBAL3A6NHL2 446 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 CRYM-AS1A6NIL9 109 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 FCGR2CP31995 323 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 CASP6P55212 293 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 DAZAP2Q15038 168 aaPredicted RBP13.91□□□□□ -0.18
LDB3-208ENST00000623007 Q5BKY6 102 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 FAM90A1Q86YD7 464 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 LILRB1Q8NHL6 650 aaPredicted RBP13.91□□□□□ -0.18
LDB3-208ENST00000623007 ELMOD3Q96FG2 381 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 C1QTNF6Q9BXI9 259 aa13.91□□□□□ -0.18
LDB3-208ENST00000623007 C5orf51A6NDU8 294 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 B3GALNT1O75752 331 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 OR2F2O95006 317 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 SIX6O95475 246 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 IFNA21P01568 189 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 IGHV3-13P01766 116 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 ZNF44P15621 663 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 MPV17P39210 176 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 ERVS71-1P61550 626 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 SNRPD2P62316 118 aaKnown RBP13.9□□□□□ -0.18
LDB3-208ENST00000623007 OR2F1Q13607 317 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 ESCO2Q56NI9 601 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 DCAF12L2Q5VW00 463 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 KCTD9Q7L273 389 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 OR8H1Q8NGG4 311 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 OR10Z1Q8NGY1 313 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 LUZP4Q9P127 313 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 MAB21L2Q9Y586 359 aa13.9□□□□□ -0.18
LDB3-208ENST00000623007 CEP250Q9BV73 2442 aa13.9□□□□□ -0.19
LDB3-208ENST00000623007 FXYD6-FXYD2A0A087WZ82 144 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 NPIPB11E5RHQ5 1161 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 C16orf97H3BN30 126 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 IFNL4K9M1U5 179 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 RP2O75695 350 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 PTBP3O95758 552 aaKnown RBP13.89□□□□□ -0.19
LDB3-208ENST00000623007 GLRA1P23415 457 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 LMO1P25800 156 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 CD200P41217 278 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 OPCMLQ14982 345 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 C2orf68Q2NKX9 166 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 SMIM21Q3B7S5 101 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 GAPTQ8N292 157 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 PRR7Q8TB68 274 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 RSRP1Q9BUV0 290 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 FXYD6Q9H0Q3 95 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 NGBQ9NPG2 151 aa13.89□□□□□ -0.19
LDB3-208ENST00000623007 EEF1E1-BLOC1S5C9J1V9 151 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 F8VVB4 439 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 F8VWA3 439 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 M0R1B8 84 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 CDIPTO14735 213 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 RHBDL1O75783 438 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 KNG1P01042 644 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 PPYP01298 95 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 RPS2P15880 293 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 PTAFRP25105 342 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 CFHR2P36980 270 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 FABP6P51161 128 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 PIGPP57054 158 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 RND3P61587 244 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 SUPT4H1P63272 117 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 SORDQ00796 357 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 PAN3Q58A45 887 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 Q6P435 159 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 TMEM108Q6UXF1 575 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 WDR86Q86TI4 376 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 ZNF546Q86UE3 836 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 LRTM2Q8N967 370 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 ZNF565Q8N9K5 539 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 C2orf50Q96LR7 162 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 MFFQ9GZY8 342 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 NAA60Q9H7X0 242 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 METTL8Q9H825 291 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 INTS1Q8N201 2190 aaKnown RBP13.88□□□□□ -0.19
LDB3-208ENST00000623007 TRAV24A0A0B4J272 114 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 VSTM5A8MXK1 200 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 ARPC5O15511 151 aa13.88□□□□□ -0.19
LDB3-208ENST00000623007 TSC22D2O75157 780 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms