RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 EIF2S3LQ2VIR3 472 aaKnown RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 ZNF468Q5VIY5 522 aaPredicted RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 TMPRSS7Q7RTY8 843 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 PUSL1Q8N0Z8 303 aaKnown RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 STARD10Q9Y365 291 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 C1QL1O75973 258 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 BCL3P20749 454 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 TMEM50BP56557 158 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 TMEM267Q0VDI3 215 aaPredicted RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 RAB31Q13636 194 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 GAPTQ8N292 157 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 NKX2-6A6NCS4 301 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SPINT2O43291 252 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 LYZL6O75951 148 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 CLPSP04118 112 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 C17orf78Q8N4C9 275 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 DEFB108BQ8NET1 73 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 NFAM1Q8NET5 270 aaPredicted RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 FBXO17Q96EF6 278 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF488Q96MN9 340 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 GPR27Q9NS67 375 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF319Q9P2F9 582 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 MPTX1A8MV57 137 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 LINC01387J3KSC0 135 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ARG1P05089 322 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 NFYBP25208 207 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 PCP4P48539 62 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 NHLH2Q02577 135 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF239Q16600 458 aaKnown RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 HIST2H3AQ71DI3 136 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SLC2A8Q9NY64 477 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 MFNGO00587 321 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 FGF5P12034 268 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 DTYMKP23919 212 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 TAS2R30P59541 319 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 BRCA2P51587 3418 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SPTBN1Q01082 2364 aaKnown RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 CLEC18AA5D8T8 446 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 MT-CO3P00414 261 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 PTAFRP25105 342 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SNRPEP62304 92 aaKnown RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 PMP22Q01453 160 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 CLEC18CQ8NCF0 446 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF524Q96C55 264 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 RPUSD4Q96CM3 377 aaKnown RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 EDEM2Q9BV94 578 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 SRXN1Q9BYN0 137 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 CACNG5Q9UF02 275 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 FZR1Q9UM11 496 aa11.18□□□□□ -0.62
MSH6-215ENST00000622629 CHCHD2Q9Y6H1 151 aaPredicted RBP11.18□□□□□ -0.62
MSH6-215ENST00000622629 ZNF407Q9C0G0 2248 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 WISP1O95388 367 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 CD8AP01732 235 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 FGF2P09038 288 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 RAB4BP61018 213 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 C4orf17Q53FE4 359 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 OR4A16Q8NH70 328 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 MALSU1Q96EH3 234 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 TLNRD1Q9H1K6 362 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 LIN7CQ9NUP9 197 aaKnown RBP11.17□□□□□ -0.62
MSH6-215ENST00000622629 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 MUC1P15941 1255 aaPredicted RBP11.17□□□□□ -0.62
MSH6-215ENST00000622629 OR10AD1Q8NGE0 317 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
MSH6-215ENST00000622629 EFNA2O43921 213 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 ACTL6BO94805 426 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 COX6A1P12074 109 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 NQO2P16083 231 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 ID4P47928 161 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 PRAMEF5Q5TYX0 476 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 PRAMEF6Q5VXH4 476 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 PAQR4Q8N4S7 273 aaPredicted RBP11.17□□□□□ -0.62
MSH6-215ENST00000622629 OR10S1Q8NGN2 331 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 MRPL13Q9BYD1 178 aaKnown RBP11.17□□□□□ -0.62
MSH6-215ENST00000622629 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 WSB1Q9Y6I7 421 aa11.17□□□□□ -0.62
MSH6-215ENST00000622629 LRP5LA4QPB2 252 aa11.16□□□□□ -0.62
MSH6-215ENST00000622629 CHST1O43916 411 aa11.16□□□□□ -0.62
MSH6-215ENST00000622629 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms