RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 C1orf87Q8N0U7 546 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 SUMF2Q8NBJ7 301 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 DMRTB1Q96MA1 342 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 TRAF4Q9BUZ4 470 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 CHST6Q9GZX3 395 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 RIMS4Q9H426 269 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 TREM2Q9NZC2 230 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 AK3Q9UIJ7 227 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 EDARQ9UNE0 448 aa11.97□□□□□ -0.49
CLTCL1-212ENST00000622493 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 PKDREJQ9NTG1 2253 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 TRAV24A0A0B4J272 114 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 POM121CA8CG34 1229 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 HAND1O96004 215 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 NAT1P18440 290 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 TBPP20226 339 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 SHEQ5VZ18 495 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 C11orf71Q6IPW1 123 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 DPCDQ9BVM2 203 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 RAB1BQ9H0U4 201 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 C12orf4Q9NQ89 552 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 NLKQ9UBE8 527 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 DNAJB11Q9UBS4 358 aa11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 RALYQ9UKM9 306 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-212ENST00000622493 UBR5O95071 2799 aaPredicted RBP11.96□□□□□ -0.5
CLTCL1-212ENST00000622493 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 A0A1W2PPR1 153 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 UBE2QL1A1L167 161 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 ZNF736B4DX44 427 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 J3QKU1 62 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 SLC33A1O00400 549 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 CD8AP01732 235 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 AKAIN1P0CW23 69 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 PLA2G2AP14555 144 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 MUC1P15941 1255 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 EGR1P18146 543 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 MICBQ29980 383 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 OR14J1Q9UGF5 321 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 WIPI2Q9Y4P8 454 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 DYSFO75923 2080 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 USP9XQ93008 2570 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 CHD6Q8TD26 2715 aa11.95□□□□□ -0.5
CLTCL1-212ENST00000622493 FAM240BA0A1B0GVZ2 78 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 RFPL4AA6NLU0 287 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 OR2AT4A6NND4 320 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 RFPL4AL1F8VTS6 287 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 H7C1Q1 480 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 CD74P04233 296 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 CD3DP04234 171 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 SOD3P08294 240 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 SLC6A1P30531 599 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 KCNJ3P48549 501 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 ACTBL2Q562R1 376 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 TEX36Q5VZQ5 186 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 DUSP18Q8NEJ0 188 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 NEK7Q8TDX7 302 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 RDH5Q92781 318 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 COPZ2Q9P299 210 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 FLNCQ14315 2725 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 SIRPB1O00241 398 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 NAPSAO96009 420 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 CYB5R3P00387 301 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 PSG2P11465 335 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 PRDX2P32119 198 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 TLE4Q04727 773 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 MEF2DQ14814 521 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 ZFAND1Q8TCF1 268 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 NEU4Q8WWR8 484 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 RANGRFQ9HD47 186 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 TMEM106BQ9NUM4 274 aa11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 ZNF701Q9NV72 531 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-212ENST00000622493 A8MV72 311 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 TMEM178BH3BS89 294 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 RAB3DO95716 219 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 HPXP02790 462 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 FCGR3AP08637 254 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 P2RX3P56373 397 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 HFEQ30201 348 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 Q6ZS49 121 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 ZNF767PQ75MW2 155 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-212ENST00000622493 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms