RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TRAV39A0A0B4J263 110 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 LILRA5A6NI73 299 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 GATCO43716 136 aaKnown RBP9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 TRAF3IP2O43734 574 aaPredicted RBP9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 HBE1P02100 147 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 CXCL1P09341 107 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 HLA-DRB3P79483 266 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 SDSLQ96GA7 329 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 SMIM7Q9BQ49 75 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 CHST5Q9GZS9 411 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 OPA3Q9H6K4 179 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 DMRT1Q9Y5R6 373 aa9.93□□□□□ -0.82
PCDHGA11-203ENST00000622044 PPYP01298 95 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 LHFPL1Q86WI0 220 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 TMEM252Q8N6L7 170 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 MARS2Q96GW9 593 aaKnown RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF665Q9H7R5 613 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 SLC7A10Q9NS82 523 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 C19orf25Q9UFG5 118 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 STARD10Q9Y365 291 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 A0A096LPE4 126 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 A0A1W2PPZ6 126 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 TRGC1P0CF51 173 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 WDR5BQ86VZ2 330 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 GAPTQ8N292 157 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 C8orf33Q9H7E9 229 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 SLC39A9Q9NUM3 307 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 EP300Q09472 2414 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 C5orf67F2Z3F1 127 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 MPPED1O15442 326 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 WDR1O75083 606 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 FOSL1P15407 271 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 PMP22Q01453 160 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 TMEM187Q14656 261 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 KHDC3LQ587J8 217 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF66Q6ZN08 573 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 AAED1Q7RTV5 226 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 OR10AD1Q8NGE0 317 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 OR6X1Q8NH79 312 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 EDARADDQ8WWZ3 215 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 EXTL1Q92935 676 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 AURKAIP1Q9NWT8 199 aaPredicted RBP9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 TREM2Q9NZC2 230 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 B3GAT1Q9P2W7 334 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 MYOTQ9UBF9 498 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 PPP1R3CQ9UQK1 317 aa9.92□□□□□ -0.82
PCDHGA11-203ENST00000622044 TPRP12270 2363 aaKnown RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF816-ZNF321PA0A0X1KG74 233 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF729A6NN14 1252 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 PPP5D1E7EU14 171 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 MASP2O00187 686 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 SOX15O60248 233 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 IFNA1P01562 189 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 FOLR2P14207 255 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 MPZP25189 248 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 GALNSP34059 522 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 PLPPR5Q32ZL2 321 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ANKRD37Q7Z713 158 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CCDC54Q8NEL0 328 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 OR1K1Q8NGR3 316 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 LHX4Q969G2 390 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF837Q96EG3 531 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 PTRH2Q9Y3E5 179 aaKnown RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 GVINP1Q7Z2Y8 2422 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CLDN34H7C241 214 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 EFNA2O43921 213 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CLDN1O95832 211 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 IGHMP01871 453 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CELA2AP08217 269 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF32P17041 273 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZP4Q12836 540 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CST9LP1Q5W188 147 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF385CQ66K41 422 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 MRPL21Q7Z2W9 205 aaKnown RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 MYPOPQ86VE0 399 aaPredicted RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 ZNF611Q8N823 705 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 MRPL38Q96DV4 380 aaKnown RBP9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 RNF122Q9H9V4 155 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
PCDHGA11-203ENST00000622044 IGKV3D-11A0A0A0MRZ8 115 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 LMO7DNF2Z398 122 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 H7BYZ3 331 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 CFPP27918 469 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 ERVFRD-1P60508 538 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 VASH2Q86V25 355 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 LYZL4Q96KX0 146 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 CALHM2Q9HA72 323 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 DNAJC13O75165 2243 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 TUSC2O75896 110 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 RPS2P15880 293 aaKnown RBP9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 HOXA5P20719 270 aa9.9□□□□□ -0.82
PCDHGA11-203ENST00000622044 HNF1AP20823 631 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms