RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HABP2Q14520 560 aaPredicted RBP8.06□□□□□ -1.12
GGA3-223ENST00000621870 RIPPLY2Q5TAB7 128 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 NAA40Q86UY6 237 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 SPACA3Q8IXA5 215 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 LHX4Q969G2 390 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 ADGRG7Q96K78 797 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 CHST5Q9GZS9 411 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 SLC35D1Q9NTN3 355 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 RNF115Q9Y4L5 304 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 A0A1B0GUH1 482 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 CYTIPO60759 359 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 H2AFB1P0C5Y9 115 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 OR4A8P0C604 315 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 PGA4P0DJD7 388 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 PGA3P0DJD8 388 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 SULT1A3P0DMM9 295 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 SULT1A4P0DMN0 295 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 CHATP28329 748 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 CD80P33681 288 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 RAB7AP51149 207 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 NANOS3P60323 173 aaKnown RBP8.06□□□□□ -1.12
GGA3-223ENST00000621870 UBE2KP61086 200 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 DHODHQ02127 395 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 AESQ08117 197 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 TMEM182Q6ZP80 229 aaPredicted RBP8.06□□□□□ -1.12
GGA3-223ENST00000621870 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 TMEM104Q8NE00 496 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 OR5AP2Q8NGF4 316 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 WDR89Q96FK6 387 aaPredicted RBP8.06□□□□□ -1.12
GGA3-223ENST00000621870 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 TMEM56Q96MV1 263 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 SLC17A5Q9NRA2 495 aa8.06□□□□□ -1.12
GGA3-223ENST00000621870 F2RP25116 425 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CSRP3P50461 194 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 FAM74A1Q5RGS3 127 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 SLC38A6Q8IZM9 456 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 SPICQ8N5J4 248 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CORO2AQ92828 525 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CCL13Q99616 98 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 INSIG2Q9Y5U4 225 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CEP295Q9C0D2 2601 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 A0A0G2JMM0 328 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 A0A1W2PPB8 328 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 A0A1W2PRS3 328 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 KIR3DP1A8MWS1 328 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 E5RGE8 158 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 GIPP09681 153 aaPredicted RBP8.05□□□□□ -1.12
GGA3-223ENST00000621870 FREM3P0C091 2139 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 LIMS1P48059 325 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CCDC190Q86UF4 302 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 TGIF2LYQ8IUE0 185 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 TGIF2LXQ8IUE1 241 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 RFLNBQ8N5W9 214 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 ZNF552Q9H707 407 aaPredicted RBP8.05□□□□□ -1.12
GGA3-223ENST00000621870 ZNF703Q9H7S9 590 aaPredicted RBP8.05□□□□□ -1.12
GGA3-223ENST00000621870 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 PURGQ9UJV8 347 aaKnown RBP8.05□□□□□ -1.12
GGA3-223ENST00000621870 KLK13Q9UKR3 277 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 TECTAO75443 2155 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 A0A0A6YYJ9 748 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 K7EQM0 130 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 CSN1S1P47710 185 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 PSMB3P49720 205 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 SSBP1Q04837 148 aaKnown RBP8.05□□□□□ -1.12
GGA3-223ENST00000621870 SPINK9Q5DT21 86 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 SLC25A30Q5SVS4 291 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 VWA1Q6PCB0 445 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 ZNF519Q8TB69 540 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 DPF1Q92782 380 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 C20orf24Q9BUV8 137 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 NPAP1Q9NZP6 1156 aa8.05□□□□□ -1.12
GGA3-223ENST00000621870 KIAA2026Q5HYC2 2103 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 CHD5Q8TDI0 1954 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 IGKV1D-42A0A075B6H8 117 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 A0A1W2PPE3 182 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 SOX15O60248 233 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 ICMTO60725 284 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 ALX3O95076 343 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 RBP4P02753 201 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 VSIG8P0DPA2 414 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 MDH2P40926 338 aaKnown RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 TRAT1Q6PIZ9 186 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 TLN1Q9Y490 2541 aaKnown RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 MTCL1Q9Y4B5 1905 aaKnown RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 A0A1W2PP11 408 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 OR5H1A6NKK0 313 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 NTN3O00634 580 aaPredicted RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 JTBO76095 146 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 TBX6O95947 436 aaPredicted RBP8.04□□□□□ -1.12
GGA3-223ENST00000621870 M6PRP20645 277 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 REG1BP48304 166 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 P2RX3P56373 397 aa8.04□□□□□ -1.12
GGA3-223ENST00000621870 IFITM3Q01628 133 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms