RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MPZL1O95297 269 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 IGHA2P01877 340 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RPL31P62899 125 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF273Q14593 569 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 GPNMBQ14956 572 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 COL19A1Q14993 1142 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 HAGHQ16775 308 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 C17orf47Q8NEP4 570 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RPUSD4Q96CM3 377 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 CES1P1Q9UKY3 287 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR2C1O95371 312 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 C1QL3Q5VWW1 255 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 C6orf201Q7Z4U5 140 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 LYG2Q86SG7 212 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ATG4DQ86TL0 474 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR4C16Q8NGL9 310 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 NRTNQ99748 197 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR1A1Q9P1Q5 309 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RCL1Q9Y2P8 373 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 SBF1O95248 1867 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 SMCHD1A6NHR9 2005 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 HRKO00198 91 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 PDLIM4P50479 330 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 CDK5Q00535 292 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ST3GAL2Q16842 350 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF561Q8N587 486 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR52B4Q8NGK2 314 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 HGDQ93099 445 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RAB33BQ9H082 229 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RFPL4AA6NLU0 287 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 RFPL4AL1F8VTS6 287 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF883P0CG24 379 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 MRM1Q6IN84 353 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM181AQ8N9Y4 354 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF764Q96H86 408 aaPredicted RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 IL17BQ9UHF5 180 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 V9GYH0 126 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 PPP5D1E7EU14 171 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM3AP98173 230 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 PAX5Q02548 391 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 OR8B12Q8NGG6 310 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 ADAMTS17Q8TE56 1095 aa8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 FLYWCH2Q96CP2 140 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-211ENST00000621271 LEUTXA8MZ59 168 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ARG1P05089 322 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ETV3LQ6ZN32 361 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM229BQ8NBD8 167 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 CYB5R1Q9UHQ9 305 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 INHBBP09529 407 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ORM2P19652 201 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 FCER1GP30273 86 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 GUCA2BQ16661 112 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ATP1A1-AS1Q5TC04 95 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF485Q8NCK3 441 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF721Q8TF20 911 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 OR2J1Q9GZK6 312 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC17A5Q9NRA2 495 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF230Q9UIE0 474 aaPredicted RBP8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 PITPNC1Q9UKF7 332 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 URGCP-MRPS24S4R325 110 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 IGHV3OR15-7A0A075B7D8 119 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 PYCARD-AS1I3L0S3 204 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 NDUFB6O95139 128 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 CELA2AP08217 269 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 IFITM3Q01628 133 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 Q8WTZ3 238 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 SFXN3Q9BWM7 321 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 GAR1Q9NY12 217 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 IFNL4K9M1U5 179 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 CST7O76096 145 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM87AP0C7U9 286 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 PGA3P0DJD8 388 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC6A1P30531 599 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 HLXQ14774 488 aaPredicted RBP8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 TSPO2Q5TGU0 170 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 MAMSTRQ6ZN01 415 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 C10orf35Q96D05 121 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 TMED3Q9Y3Q3 217 aa8.6□□□□□ -1.03
CLTCL1-211ENST00000621271 TO15178 435 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 ZFPL1O95159 310 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM106CPP0CH98 169 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 FCARP24071 287 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 C19orf57Q0VDD7 668 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 MESP2Q0VG99 397 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 GAMTQ14353 236 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SP6Q3SY56 376 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM162BQ5T6X4 162 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 LILRB1Q8NHL6 650 aaPredicted RBP8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 CLCF1Q9UBD9 225 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC45A2Q9UMX9 530 aa8.59□□□□□ -1.03
CLTCL1-211ENST00000621271 SVILO95425 2214 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms