RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 RAB35Q15286 201 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 RAB30Q15771 203 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 TMEM42Q69YG0 159 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 LHFPL2Q6ZUX7 228 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 TMEM217Q8N7C4 229 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 CYB561D1Q8N8Q1 229 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 CCDC54Q8NEL0 328 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 PAPOLGQ9BWT3 736 aaKnown RBP7.57□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF700Q9H0M5 742 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF442Q9H7R0 627 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 SLC7A10Q9NS82 523 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 DOK5Q9P104 306 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 RARRES3Q9UL19 164 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 SLC7A11Q9UPY5 501 aa7.57□□□□□ -1.2
TRIM6-212ENST00000621176 TP53I11O14683 189 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 PITX3O75364 302 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 OR7C1O76099 320 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 CDS2O95674 445 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 B4GALT1P15291 398 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF32P17041 273 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 RAB2AP61019 212 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 DLK1P80370 383 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 MALLQ13021 153 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 C9orf152Q5JTZ5 239 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 GUSBP11Q6P575 273 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 TBC1D26Q86UD7 250 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 OR1F12Q8NHA8 337 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 FGFBP3Q8TAT2 258 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 LYRM2Q9NU23 88 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 KIAA1456Q9P272 454 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 WNT16Q9UBV4 365 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 CEP192Q8TEP8 1941 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF407Q9C0G0 2248 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 CACNA1EQ15878 2313 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ADAM20O43506 726 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 NDUFS6O75380 124 aaKnown RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 LIFP15018 202 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 DYNLT3P51808 116 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 RBM11P57052 281 aaKnown RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 UBE2KP61086 200 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ICAM4Q14773 271 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 OR2B11Q5JQS5 317 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 SPNS3Q6ZMD2 512 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF429Q86V71 674 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF100Q8IYN0 542 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 PIGCQ92535 297 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 NAT6Q93015 286 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 ALKBH3Q96Q83 286 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 PLEKHF2Q9H8W4 249 aa7.56□□□□□ -1.2
TRIM6-212ENST00000621176 UBE2J1Q9Y385 318 aaPredicted RBP7.56□□□□□ -1.2
TRIM6-212ENST00000621176 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 BCAT2O15382 392 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 TOX3O15405 576 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 FUT3P21217 361 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 LBX1P52954 281 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 PSG4Q00888 419 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 PCOLCEQ15113 449 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 EXT1Q16394 746 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 SPIN3Q5JUX0 258 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 TMEM211Q6ICI0 200 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF695Q8IW36 515 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 SELENOHQ8IZQ5 122 aaKnown RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 GPR137CQ8N3F9 429 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 TMEM56Q96MV1 263 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 SIGLEC12Q96PQ1 595 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HS3ST3B1Q9Y662 390 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 TMEM56-RWDD3S4R434 201 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 A0A087WZY1 265 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 IGHV5-10-1A0A0J9YXX1 117 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 hCG_38984A0A1B0GV85 526 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 OR6C6A6NF89 314 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 ZNHIT1O43257 154 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BKO60814 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BJP06899 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BOP23527 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BBP33778 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 DSCR4P56555 118 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BDP58876 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BCP62807 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 CCL7P80098 99 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST2H2BEQ16778 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 ZNF674Q2M3X9 581 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 PLCXD3Q63HM9 321 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BHQ93079 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BNQ99877 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 HIST1H2BMQ99879 126 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 IL36GQ9NZH8 169 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 C19orf25Q9UFG5 118 aaPredicted RBP7.55□□□□□ -1.2
TRIM6-212ENST00000621176 DMRT1Q9Y5R6 373 aa7.55□□□□□ -1.2
TRIM6-212ENST00000621176 WSB1Q9Y6I7 421 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms