RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR4S2Q8NH73 311 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ROBO4Q8WZ75 1007 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 STARD10Q9Y365 291 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C19orf67A6NJJ6 358 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 A8MWL6 223 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 IL4P05112 153 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CEACAM3P40198 252 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 GPR3P46089 330 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 GAB4Q2WGN9 574 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ZNF260Q3ZCT1 412 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 Q56UQ5 140 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C1orf220Q5T0J3 134 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C16orf47Q6ZP98 133 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 FGF21Q9NSA1 209 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 KLK11Q9UBX7 282 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 MTCH2Q9Y6C9 303 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 KIR3DL2P43630 455 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 GNG3P63215 75 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PPP1R1AQ13522 171 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C12orf73Q69YU5 71 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 TBC1D26Q86UD7 250 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ATAD5Q96QE3 1844 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CRYAAP02489 173 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 GAPDHP04406 335 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SOD3P08294 240 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PPICP45877 212 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PPIAP62937 165 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 FNDC7Q5VTL7 733 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 LINC00596Q86U02 117 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 KMT5CQ86Y97 462 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C9orf62Q8N4C0 152 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 MYOZ1Q9NP98 299 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 TREM2Q9NZC2 230 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 UFC1Q9Y3C8 167 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 WIPI2Q9Y4P8 454 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 TOGARAM1Q9Y4F4 1720 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 IGKV6-21A0A0C4DH24 114 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RBFOX2O43251 390 aaKnown RBP eCLIP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 IGHV3-9P01782 118 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 HLA-DRB1P01911 266 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 HOXA4Q00056 320 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 TMEM65Q6PI78 240 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CD300LDQ6UXZ3 194 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ASCL4Q6XD76 172 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 Q71RC1 249 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RPEQ96AT9 228 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SIGLEC11Q96RL6 698 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C6orf106Q9H6K1 298 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ASCC3Q8N3C0 2202 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 A0A1B0GU03 582 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 NPIPB6E9PJ23 425 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 MPDU1O75352 247 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 HPXP02790 462 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CTGFP29279 349 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CCR5P51681 352 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 LIM2P55344 173 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ACSM5Q6NUN0 579 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ETFBKMTQ8IXQ9 262 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SARAFQ96BY9 339 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SNRNP40Q96DI7 357 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 DERL3Q96Q80 235 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 HIST1H4GQ99525 98 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PSMG3Q9BT73 122 aaPredicted RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SYT11Q9BT88 431 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 C20orf27Q9GZN8 174 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 LOXL2Q9Y4K0 774 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PRSS21Q9Y6M0 314 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 PITX3O75364 302 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SPNP16150 400 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 VDAC1P21796 283 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 MMP16P51512 607 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 RPL18Q07020 188 aaKnown RBP6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ZNF124Q15973 351 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ACSM6Q6P461 480 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 CALHM1Q8IU99 346 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 BEND2Q8NDZ0 799 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 OR8A1Q8NGG7 326 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 OR1P1Q8NH06 330 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 OTOSQ8NHW6 89 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 SPANXDQ9BXN6 97 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 ICAM5Q9UMF0 924 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 USP3Q9Y6I4 520 aa6.39□□□□□ -1.39
COLCA1-205ENST00000620864 OR4C46A6NHA9 309 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 RBP4P02753 201 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 NPEPL1Q8NDH3 523 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 PRELID3AQ96N28 172 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 GUCD1Q96NT3 240 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 LPAR5Q9H1C0 372 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 DHCR7Q9UBM7 475 aaKnown RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 TRPM3Q9HCF6 1732 aaPredicted RBP6.38□□□□□ -1.39
COLCA1-205ENST00000620864 ALOX12BO75342 701 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 C1SP09871 688 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 CTSCP53634 463 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 PFN3P60673 137 aa6.38□□□□□ -1.39
COLCA1-205ENST00000620864 PITX1P78337 314 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms