RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 PCDHGB5Q9Y5G0 923 aa13.83□□□□□ -0.2
HMGN3-203ENST00000620514 TRGV10A0A0A0MS01 117 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 FAM172BPA6NC97 362 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 GABRPO00591 440 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 DEGS1O15121 323 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 RPSAP08865 295 aaKnown RBP13.82□□□□□ -0.2
HMGN3-203ENST00000620514 RAB3AP20336 220 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 CDK2P24941 298 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 SLC34A1Q06495 639 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 ATXN7L3Q14CW9 347 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-203ENST00000620514 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 RPL22L1Q6P5R6 122 aaKnown RBP13.82□□□□□ -0.2
HMGN3-203ENST00000620514 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 OR4P4Q8NGL7 312 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 HAVCR2Q8TDQ0 301 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 CYGBQ8WWM9 190 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 CORO2AQ92828 525 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 NR1H4Q96RI1 486 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-203ENST00000620514 PPIL3Q9H2H8 161 aaKnown RBP13.82□□□□□ -0.2
HMGN3-203ENST00000620514 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 KIAA2026Q5HYC2 2103 aa13.82□□□□□ -0.2
HMGN3-203ENST00000620514 ODAMA1E959 279 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 HSPB6O14558 160 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 LALBAP00709 142 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 VSIG10L2P0DP72 767 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 DCKP27707 260 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 MTNR1BP49286 362 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 C2orf68Q2NKX9 166 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 KRBOX4Q5JUW0 171 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 UTF1Q5T230 341 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 HEPN1Q6WQI6 88 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 Q6ZTK2 550 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 ABHD12Q8N2K0 398 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 CHST4Q8NCG5 386 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 PXT1Q8NFP0 134 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 OR10K1Q8NGX5 313 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 GPR148Q8TDV2 347 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 TNFAIP8L1Q8WVP5 186 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 GAL3ST2Q9H3Q3 398 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 TAS2R3Q9NYW6 316 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 CLEC2DQ9UHP7 191 aa13.81□□□□□ -0.2
HMGN3-203ENST00000620514 TET2Q6N021 2002 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-203ENST00000620514 FUOMA2VDF0 154 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 H0YJX3 145 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 F2RL2O00254 374 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 CSN2P05814 226 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 HTR1DP28221 377 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 DYNLT3P51808 116 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 ADARB1P78563 741 aaKnown RBP13.8□□□□□ -0.2
HMGN3-203ENST00000620514 CCDC58Q4VC31 144 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 C11orf88Q6PI97 169 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 TMPRSS11AQ6ZMR5 421 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 Q6ZS46 218 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 OR13C5Q8NGS8 318 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 CFHR4Q92496 578 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 ORAI1Q96D31 301 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 GPER1Q99527 375 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 CDCA4Q9BXL8 241 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF286AQ9HBT8 521 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 SERTAD4Q9NUC0 356 aa13.8□□□□□ -0.2
HMGN3-203ENST00000620514 TRAV24A0A0B4J272 114 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 MAGEB3O15480 346 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 OGG1O15527 345 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 CSF1P09603 554 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 PTGFRP43088 359 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 OR3A4PP47883 348 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 RCN1Q15293 331 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 C17orf58Q2M2W7 97 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 PIGYQ3MUY2 71 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 TTC23Q5W5X9 447 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 OR52W1Q6IF63 320 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 Q8N2B8 174 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 TMEM106AQ96A25 262 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 BABAM2Q9NXR7 383 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 ZNF581Q9P0T4 197 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 PITPNC1Q9UKF7 332 aa13.79□□□□□ -0.2
HMGN3-203ENST00000620514 DIMT1Q9UNQ2 313 aaKnown RBP13.79□□□□□ -0.2
HMGN3-203ENST00000620514 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
HMGN3-203ENST00000620514 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 IRGMA1A4Y4 181 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 FAM90A22PA8MWA6 464 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 CDRT1O95170 752 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 HTR3BO95264 441 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 IGLV1-47P01700 117 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 CD2P06729 351 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 CD24P25063 80 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 BLCAPP62952 87 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 BDH1Q02338 343 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 RSU1Q15404 277 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 PDLIM3Q53GG5 364 aaPredicted RBP13.78□□□□□ -0.2
HMGN3-203ENST00000620514 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
HMGN3-203ENST00000620514 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 RTN4RL2Q86UN3 420 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 DHRSXQ8N5I4 330 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 ZFP41Q8N8Y5 198 aa13.78□□□□□ -0.2
HMGN3-203ENST00000620514 OR51T1Q8NGJ9 327 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms