RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MYOZ1Q9NP98 299 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 OR14J1Q9UGF5 321 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF222Q9UK12 451 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ARFGEF3Q5TH69 2177 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM82A0PJX8 343 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 UBE2QL1A1L167 161 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM235A6NFC5 223 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 GABARAPH6UMI1 98 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 K7N7A8 449 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 SIRPB1O00241 398 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 PPIHO43447 177 aaKnown RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 GSTZ1O43708 216 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 PSPNO60542 156 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 IGHV2-70P01814 119 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 GYPAP02724 150 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 TFF1P04155 84 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 PTHLHP12272 177 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 MDH2P40926 338 aaKnown RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 ATP5J2P56134 94 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 BTG1P62324 171 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 RBM39Q14498 530 aaKnown RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 ZMYND11Q15326 602 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 SHEQ5VZ18 495 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 OLFML2AQ68BL7 652 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 RTN4RL2Q86UN3 420 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 BPIFB2Q8N4F0 458 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 OR5D13Q8NGL4 314 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 GPX8Q8TED1 209 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 FCAMRQ8WWV6 532 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 TIMD4Q96H15 378 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 MED30Q96HR3 178 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 SNX22Q96L94 193 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 CCL13Q99616 98 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM246Q9BRR3 403 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 THAP7Q9BT49 309 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 GSX2Q9BZM3 304 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 SHARPINQ9H0F6 387 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF665Q9H7R5 613 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 SCPEP1Q9HB40 452 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 ELF5Q9UKW6 265 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 MAB21L2Q9Y586 359 aa6.7□□□□□ -1.34
CPNE3-209ENST00000620393 FASNP49327 2511 aaKnown RBP6.7□□□□□ -1.34
CPNE3-209ENST00000620393 USF3Q68DE3 2245 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 DOPEY2Q9Y3R5 2298 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 MEIOCA2RUB1 952 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 J3QRK9 145 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 SIGLEC5O15389 551 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 SSX4O60224 188 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF737O75373 536 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 RBBP9O75884 186 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CD3GP09693 182 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 DNASE1P24855 282 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 GIFP27352 417 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 GPR6P46095 362 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 KCNJ3P48549 501 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CEBPDP49716 269 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 PDLIM4P50479 330 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 GNG2P59768 71 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 DGCR2P98153 550 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 ARFRP1Q13795 201 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CARTPTQ16568 116 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 BAK1Q16611 211 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 TMEM155Q4W5P6 130 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 C17orf107Q6ZR85 190 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 DCDC5Q6ZRR9 648 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 SLC36A1Q7Z2H8 476 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 OR8H2Q8N162 312 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 MUC20Q8N307 709 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 Q8N402 240 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF561Q8N587 486 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 OR4S1Q8NGB4 309 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 OR52I2Q8NH67 350 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 SMIM4Q8WVI0 70 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CYYR1Q96J86 154 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 GAFA1Q96PS6 74 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CMSS1Q9BQ75 279 aaKnown RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 CCDC32Q9BV29 185 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 FAM234AQ9H0X4 552 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 RIMS4Q9H426 269 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 BEX4Q9NWD9 120 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-209ENST00000620393 ETAA1Q9NY74 926 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 KAAG1Q9UBP8 84 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 MTFP1Q9UDX5 166 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 AK3Q9UIJ7 227 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 TENM4Q6N022 2769 aa6.69□□□□□ -1.34
CPNE3-209ENST00000620393 TRBV6-6A0A0A6YYG2 114 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NKX6-3A6NJ46 265 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 H7C1Q1 480 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 NDUFS8O00217 210 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 HSPB6O14558 160 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 MGST3O14880 152 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 ADAM20O43506 726 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 LANCL1O43813 399 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 ORC5O43913 435 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 SSX5O60225 188 aa6.68□□□□□ -1.34
CPNE3-209ENST00000620393 MT-ND4P03905 459 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms