RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 OR5AU1Q8NGC0 362 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 OR4X2Q8NGF9 303 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 SGCDQ92629 289 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 MMP28Q9H239 520 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 FAM53CQ9NYF3 392 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 IL36RNQ9UBH0 155 aa9.56□□□□□ -0.88
UPF3B-204ENST00000619445 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
UPF3B-204ENST00000619445 A0A087X0M5 115 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 A0A1B0GX30 115 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 MEX3AA1L020 520 aaKnown RBP9.55□□□□□ -0.88
UPF3B-204ENST00000619445 OR4C45A6NMZ5 311 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 DEGS1O15121 323 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 MAGEB3O15480 346 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 IGLV1-47P01700 117 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 HCKP08631 526 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 PF4V1P10720 104 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 CD33P20138 364 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 KCNJ3P48549 501 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 MTNR1BP49286 362 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 ALDH3A2P51648 485 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 LOXL3P58215 753 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 BLCAPP62952 87 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 KRBOX4Q5JUW0 171 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 CENPVQ7Z7K6 275 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-204ENST00000619445 OR13C9Q8NGT0 318 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-204ENST00000619445 PELI1Q96FA3 418 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 RBM14Q96PK6 669 aaKnown RBP9.55□□□□□ -0.88
UPF3B-204ENST00000619445 OCSTAMPQ9BR26 566 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 SLC25A33Q9BSK2 321 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 GPR61Q9BZJ8 451 aa9.55□□□□□ -0.88
UPF3B-204ENST00000619445 EXOGQ9Y2C4 368 aaKnown RBP9.55□□□□□ -0.88
UPF3B-204ENST00000619445 BUB1B-PAK6H3BSN5 160 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 J3QLW9 94 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 SULT1B1O43704 296 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 FAM106CPP0CH98 169 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 TMEM225BP0DP42 221 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF19P17023 458 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 C21orf33P30042 268 aaPredicted RBP9.54□□□□□ -0.88
UPF3B-204ENST00000619445 SNU13P55769 128 aaKnown RBP9.54□□□□□ -0.88
UPF3B-204ENST00000619445 NANOS3P60323 173 aaKnown RBP9.54□□□□□ -0.88
UPF3B-204ENST00000619445 SLC35A2P78381 396 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 PAX5Q02548 391 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 AESQ08117 197 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 GALEQ14376 348 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 HLA-DRB5Q30154 266 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 PRAMEF5Q5TYX0 476 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 ELP2Q6IA86 826 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 SLC16A12Q6ZSM3 486 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 PARP16Q8N5Y8 322 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 PXT1Q8NFP0 134 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 OR9G1Q8NH87 305 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 C4orf36Q96KX1 117 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 OR5M11Q96RB7 305 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 BARHL1Q9BZE3 327 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 MYRFQ9Y2G1 1151 aa9.54□□□□□ -0.88
UPF3B-204ENST00000619445 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 KBTBD11-OT1A0A1B0GTJ5 212 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 TCRBV4S1A1TA0A5B7 111 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 EI24O14681 340 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 PF4P02776 101 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 CD2P06729 351 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 SLC6A1P30531 599 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 GLIPR1P48060 266 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 SCN1BQ07699 218 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 RAB40BQ12829 278 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 IL13RA2Q14627 380 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 KISS1Q15726 138 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 TPTE2P1Q5T6R2 138 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 Q6ZPA2 131 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 THNSL2Q86YJ6 484 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 LYG1Q8N1E2 194 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 OR10A7Q8NGE5 316 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 RFT1Q96AA3 541 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 RPEQ96AT9 228 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 PHF21AQ96BD5 680 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 RCC1LQ96I51 464 aaKnown RBP9.53□□□□□ -0.88
UPF3B-204ENST00000619445 ALG8Q9BVK2 526 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 GMPPBQ9Y5P6 360 aa9.53□□□□□ -0.88
UPF3B-204ENST00000619445 SLC33A1O00400 549 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-204ENST00000619445 MMP23AO75900 390 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 RAB3AP20336 220 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 GBX2P52951 348 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-204ENST00000619445 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 KLHL22Q53GT1 634 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 PAN3Q58A45 887 aaKnown RBP9.52□□□□□ -0.88
UPF3B-204ENST00000619445 ZNF691Q5VV52 312 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 Q6P435 159 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 OR51A4Q8NGJ6 313 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 OR51T1Q8NGJ9 327 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 OR5D18Q8NGL1 313 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 OR5AK2Q8NH90 309 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 PYDC1Q8WXC3 89 aa9.52□□□□□ -0.88
UPF3B-204ENST00000619445 LGALS12Q96DT0 336 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms