RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 A0A0U1RQK1 487 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 A0A1W2PPK0 400 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 A0A1W2PQ09 198 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 hADV38S2A0JD32 116 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 MEGF11A6BM72 1044 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 DNAJC9-AS1A6NH13 148 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A8PA6NJQ4 464 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 RNF212BA8MTL3 300 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 ODF3BA8MYP8 253 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 CDRT1O95170 752 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 MELTFP08582 738 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 ZNF728P0DKX0 622 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 CCL3L1P16619 93 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SRMP19623 302 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GALP22466 123 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GABRA5P31644 462 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 CAPZA1P52907 286 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 DLX1P56177 255 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 RBM11P57052 281 aaKnown RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 BLMHQ13867 455 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SLC9A3R2Q15599 337 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GRK1Q15835 563 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SSX1Q16384 188 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 MIDNQ504T8 468 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 FAM27D1Q5T7N8 215 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GDPD3Q7L5L3 318 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SATL1Q86VE3 508 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 FAM185AQ8N0U4 392 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SPARTQ8N0X7 666 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GAPTQ8N292 157 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 OSR2Q8N2R0 312 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 ASCC1Q8N9N2 400 aaKnown RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 OR11H6Q8NGC7 330 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 OR4D6Q8NGJ1 314 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 PPP1R35Q8TAP8 253 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 COQ2Q96H96 371 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 GPER1Q99527 375 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 NKX3-1Q99801 234 aaPredicted RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 TMED9Q9BVK6 235 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 CHST6Q9GZX3 395 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 METTL9Q9H1A3 318 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 MEGF9Q9H1U4 602 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 Q9H521 79 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 SIRT7Q9NRC8 400 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 RCC2Q9P258 522 aaKnown RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 GHRLQ9UBU3 117 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 UBE2J1Q9Y385 318 aaPredicted RBP6.73□□□□□ -1.33
NEK3-209ENST00000618856 LRRC42Q9Y546 428 aa6.73□□□□□ -1.33
NEK3-209ENST00000618856 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 A0A087X0M5 115 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 MDFIC2A0A1B0GVS7 189 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 A0A1B0GX30 115 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 A0A1W2PP11 408 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A10PA6NDY2 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A18PA6NE21 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A16PA6NEW6 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A20PA6NIJ5 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A22PA8MWA6 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A12PA8MX19 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A5PA8MXJ8 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 TRIM77I1YAP6 450 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 SIRPB1O00241 398 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 DEGS1O15121 323 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 NPFFO15130 113 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 SLC22A1O15245 554 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A15PP0C7V4 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A13PP0C7W8 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A14PP0C7W9 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FAM90A24PP0C7X0 464 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 IGHV1-8P0DP01 117 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 GABRR1P24046 479 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 CFPP27918 469 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 IER3P46695 156 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 KCNJ3P48549 501 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 RPS25P62851 125 aaKnown RBP6.72□□□□□ -1.33
NEK3-209ENST00000618856 QRFPP83859 136 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FABP5Q01469 135 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 AESQ08117 197 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 BAMBIQ13145 260 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 KLRD1Q13241 179 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 GPR176Q14439 515 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 RSU1Q15404 277 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 AANATQ16613 207 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 PIGYQ3MUY2 71 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 RSBN1Q5VWQ0 802 aaPredicted RBP6.72□□□□□ -1.33
NEK3-209ENST00000618856 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
NEK3-209ENST00000618856 CEACAM19Q7Z692 300 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 OR10K1Q8NGX5 313 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 MUL1Q969V5 352 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 SLC25A28Q96A46 364 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 FOXRED1Q96CU9 486 aaPredicted RBP6.72□□□□□ -1.33
NEK3-209ENST00000618856 ZNF714Q96N38 554 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 GFI1Q99684 422 aa6.72□□□□□ -1.33
NEK3-209ENST00000618856 CCDC90BQ9GZT6 254 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms