RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SHISA2Q6UWI4 295 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 TRAPPC6BQ86SZ2 158 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 CHST4Q8NCG5 386 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF184Q99676 751 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-228ENST00000618469 LINC00312Q9Y6C7 94 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 TRBV5-7A0A0A0MS05 114 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 A0A0G2JK05 382 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 A0A1W2PPK0 400 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 BTBD17A6NE02 478 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 SLC33A1O00400 549 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-228ENST00000618469 HSPB6O14558 160 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 CDRT1O95170 752 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 HTR3BO95264 441 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 RBP4P02753 201 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 SLC35A2P78381 396 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 BDH1Q02338 343 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 RNLSQ5VYX0 342 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 ELP2Q6IA86 826 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 Q6P435 159 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 C17orf50Q8WW18 174 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 CNBD2Q96M20 576 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 DERL3Q96Q80 235 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 CDCA4Q9BXL8 241 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 DPAGT1Q9H3H5 408 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 TPRKBQ9Y3C4 175 aa13.02□□□□□ -0.33
BRCA1-228ENST00000618469 DEGS1O15121 323 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 CLPXO76031 633 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 CRYBA1P05813 215 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 CD1AP06126 327 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 IGHV1-8P0DP01 117 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 SERPINA2P20848 420 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 OMGP23515 440 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 ERP29P30040 261 aaKnown RBP13.01□□□□□ -0.33
BRCA1-228ENST00000618469 PTGFRP43088 359 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 MED22Q15528 200 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 TAF9Q16594 264 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 S100A13Q99584 98 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 METTL9Q9H1A3 318 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
BRCA1-228ENST00000618469 LSM2Q9Y333 95 aaKnown RBP13.01□□□□□ -0.33
BRCA1-228ENST00000618469 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 FUOMA2VDF0 154 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 RGS10O43665 173 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 GPR137BO60478 399 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 GPX5O75715 221 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 MAS1P04201 325 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 CSN2P05814 226 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 LMO1P25800 156 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 MAPK3P27361 379 aaPredicted RBP13□□□□□ -0.33
BRCA1-228ENST00000618469 TGFBR2P37173 567 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 GLIPR1P48060 266 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 LGALS4P56470 323 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 AESQ08117 197 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 IRF3Q14653 427 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 SPHARQ15513 63 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 PAN3Q58A45 887 aaKnown RBP13□□□□□ -0.33
BRCA1-228ENST00000618469 KRBOX4Q5JUW0 171 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 OR51T1Q8NGJ9 327 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 DYRK2Q92630 601 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 THRSPQ92748 146 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 COQ2Q96H96 371 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 TMED9Q9BVK6 235 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 CCDC90BQ9GZT6 254 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 IL36GQ9NZH8 169 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
BRCA1-228ENST00000618469 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 ODAMA1E959 279 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 PIN1P1O15428 100 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 CSTBP04080 98 aaKnown RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 ARG1P05089 322 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 MDKP21741 143 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 CRHBPP24387 322 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 PAX6P26367 422 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 RAG2P55895 527 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 INSL4Q14641 139 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 PRAMEF5Q5TYX0 476 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 MUL1Q969V5 352 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 GAL3ST2Q9H3Q3 398 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 DUSP21Q9H596 190 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 C1RLQ9NZP8 487 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 FOXJ3Q9UPW0 622 aa12.99□□□□□ -0.33
BRCA1-228ENST00000618469 UBE2J1Q9Y385 318 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 PRKDCP78527 4128 aaKnown RBP12.99□□□□□ -0.33
BRCA1-228ENST00000618469 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 A0A1W2PP11 408 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 H3BUX3 64 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 OR7C1O76099 320 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms