RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF107Q9UII5 783 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 OR52N5Q8NH56 324 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 DSCR3O14972 297 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 TRGC1P0CF51 173 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF542PQ5EBM4 170 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 TCTN3Q6NUS6 607 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 PELI1Q96FA3 418 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 SBK3P0C264 359 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 FCARP24071 287 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 CST6Q15828 149 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 C1orf220Q5T0J3 134 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 FNDC7Q5VTL7 733 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 TMEM64Q6YI46 380 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZDHHC23Q8IYP9 409 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 RBKSQ9H477 322 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 CNTD2Q9H8S5 307 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 RBP4P02753 201 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 PRDX4Q13162 271 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 PSG5Q15238 335 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 RAXQ9Y2V3 346 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 EIF4E2O60573 245 aaKnown RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 NTSR1P30989 418 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF766Q5HY98 468 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 TLNRD1Q9H1K6 362 aa13.42□□□□□ -0.26
COL5A1-208ENST00000618395 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 GPR3P46089 330 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 LSM10Q969L4 123 aaKnown RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 OCIAD1Q9NX40 245 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 TNFSF18Q9UNG2 199 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 APOBEC1P41238 236 aaKnown RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 GLIPR1P48060 266 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 TMEM108Q6UXF1 575 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 OR1B1Q8NGR6 318 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 SLCO1C1Q9NYB5 712 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 SLC25A37Q9NYZ2 338 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 TRAV8-7A0A075B6U6 113 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 PAGE4O60829 102 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 PRICKLE4Q2TBC4 344 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 JMJD6Q6NYC1 403 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 MISP3Q96FF7 219 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 RICTORQ6R327 1708 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 CRYAAP02489 173 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 AMY1AP04745 511 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 OR2I1PQ8NGU4 316 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 MS4A8Q9BY19 250 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 PRSS21Q9Y6M0 314 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 FUT6P51993 359 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 CLDN15P56746 228 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 SLC48A1Q6P1K1 146 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 EGLN1Q9GZT9 426 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF346Q9UL40 294 aaKnown RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 MDKP21741 143 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
COL5A1-208ENST00000618395 ACRP10323 421 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 SLC16A11Q8NCK7 471 aa13.41□□□□□ -0.26
COL5A1-208ENST00000618395 A8MWL6 223 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 DEGS2Q6QHC5 323 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 SLCO4C1Q6ZQN7 724 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 C14orf144Q96I85 54 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 FGF18O76093 207 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 HPRT1P00492 218 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 FUT3P21217 361 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 ERV3-1Q14264 604 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 CPEB3Q8NE35 698 aaKnown RBP13.4□□□□□ -0.26
COL5A1-208ENST00000618395 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
COL5A1-208ENST00000618395 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 APOMO95445 188 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 PIK3C2AO00443 1686 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF840PA6NDX5 716 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 PRSS2P07478 247 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-208ENST00000618395 ZNF137PP52743 207 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 RGS7BPQ6MZT1 257 aaPredicted RBP13.4□□□□□ -0.26
COL5A1-208ENST00000618395 BOD1Q96IK1 185 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 PPT2Q9UMR5 302 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 F11P03951 625 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 DUSP13Q9UII6 198 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 Q9Y3F1 56 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 KBTBD11O94819 623 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 CXCL2P19875 107 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 SLC25A26Q70HW3 274 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 WDR13Q9H1Z4 485 aa13.4□□□□□ -0.26
COL5A1-208ENST00000618395 KIR2DL1P43626 348 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 KIR2DL2P43627 348 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SMIM21Q3B7S5 101 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 DNASE2BQ8WZ79 361 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 ZNF260Q3ZCT1 412 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 SFXN1Q9H9B4 322 aa13.39□□□□□ -0.27
COL5A1-208ENST00000618395 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-208ENST00000618395 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms