RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 SERPINE3A8MV23 424 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 RHBDL1O75783 438 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SNU13P55769 128 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 GNG3P63215 75 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 EMG1Q92979 244 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MRPS24Q96EL2 167 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 DMRTA2Q96SC8 542 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PRRT1Q99946 306 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ST6GALNAC5Q9BVH7 336 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 RASL12Q9NYN1 266 aa17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SMG1Q96Q15 3661 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3B-212ENST00000617422 IGHV3-64DA0A0J9YX35 117 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 OR5B21A6NL26 309 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SELEP16581 610 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MPZP25189 248 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 DHRS2Q13268 280 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 RNASE10Q5GAN6 216 aaKnown RBP17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TMEM200AQ86VY9 491 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SAXO1Q8IYX7 474 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 AK3Q9UIJ7 227 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 POLEQ07864 2286 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 M0R1B8 84 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FABP6P51161 128 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ELP2Q6IA86 826 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 OR4K15Q8NH41 348 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PHYHIPLQ96FC7 376 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 HSF4Q9ULV5 492 aa17.56■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MLNRO43193 412 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TSPAN9O75954 239 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 HLA-GP17693 338 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PPA1Q15181 289 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SCGB2B2Q4G0G5 96 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 C11orf87Q6NUJ2 197 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MRGPRGQ86SM5 289 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 HOGA1Q86XE5 327 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PURGQ9UJV8 347 aaKnown RBP17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TNFSF18Q9UNG2 199 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 BCL2L11O43521 198 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 KLRB1Q12918 225 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FAM76BQ5HYJ3 339 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 Q6ZPA2 131 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 Q6ZR03 302 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 STPG2Q8N412 459 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ADAT1Q9BUB4 502 aaKnown RBP17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PIGMQ9H3S5 423 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 JKAMPQ9P055 326 aa17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 NOP16Q9Y3C1 178 aaKnown RBP17.55■□□□□ 0.4
CNTNAP3B-212ENST00000617422 OR2AT4A6NND4 320 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TOR1AO14656 332 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FGF12P61328 243 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TMEM17Q86X19 198 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ZNF573Q86YE8 665 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ZDHHC22Q8N966 263 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PDCD10Q9BUL8 212 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 BCL2L14Q9BZR8 327 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FN3KRPQ9HA64 309 aa17.54■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FAM221AA4D161 298 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 CA11O75493 328 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 HLA-AP01891 365 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 DUSP1P28562 367 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SLC25A42Q86VD7 318 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MKXQ8IYA7 352 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MUCL1Q96DR8 90 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 MS4A7Q9GZW8 240 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 OR7C1O76099 320 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 C17orf107Q6ZR85 190 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 LYG2Q86SG7 212 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 RTL8AQ9BWD3 113 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PRORYQ9H606 182 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ZNF701Q9NV72 531 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 VSIG4Q9Y279 399 aa17.53■□□□□ 0.4
CNTNAP3B-212ENST00000617422 NBASA2RRP1 2371 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 TRAPPC2LH3BP13 241 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PDCD6O75340 191 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 KITLGP21583 273 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 RBMXP38159 391 aaKnown RBP17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 IL24Q13007 206 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ZNF154Q13106 437 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FAHD2BQ6P2I3 314 aaPredicted RBP17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 ACOT7LQ6ZUV0 252 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 LRP11Q86VZ4 500 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 SCCPDHQ8NBX0 429 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 OR8G5Q8NG78 346 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 FAHD2AQ96GK7 314 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 PLEKHA6Q9Y2H5 1048 aa17.52■□□□□ 0.4
CNTNAP3B-212ENST00000617422 AMY2BP19961 511 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 TBPP20226 339 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 ZBTB25P24278 435 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 CBX5P45973 191 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 ARL6IP1Q15041 203 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 MBNL2Q5VZF2 373 aaKnown RBP17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 VRK1Q99986 396 aaPredicted RBP17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 MICU1Q9BPX6 476 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 PKIBQ9C010 78 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 MSL2Q9HCI7 577 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 PCDHB16Q9NRJ7 776 aa17.52■□□□□ 0.39
CNTNAP3B-212ENST00000617422 ATP6V1G2-DDX39BF2Z307 99 aa17.51■□□□□ 0.39
CNTNAP3B-212ENST00000617422 TEX46H3BTG2 121 aa17.51■□□□□ 0.39
CNTNAP3B-212ENST00000617422 SDCBPO00560 298 aaPredicted RBP17.51■□□□□ 0.39
CNTNAP3B-212ENST00000617422 HOXA4Q00056 320 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms