RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
NR1H3-235ENST00000616973 AQP10Q96PS8 301 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 OR2J1Q9GZK6 312 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 I3L521 148 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 SHOXO15266 292 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 TUBG1P23258 451 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 HOXC12P31275 282 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 NUP62P37198 522 aaPredicted RBP13.41□□□□□ -0.26
NR1H3-235ENST00000616973 NAAAQ02083 359 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 IGSF11Q5DX21 431 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 Q8IYB0 196 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 FAM185AQ8N0U4 392 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 C17orf78Q8N4C9 275 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 OR1S1Q8NH92 325 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 SLC25A40Q8TBP6 338 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 CXorf58Q96LI9 332 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 TUBG2Q9NRH3 451 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 DKK4Q9UBT3 224 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 PFDN2Q9UHV9 154 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
NR1H3-235ENST00000616973 EP300Q09472 2414 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-235ENST00000616973 GTF3C1Q12789 2109 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 A0A1B0GW55 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-235ENST00000616973 ZNF205O95201 554 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L2P0CJ85 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L3P0CJ86 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L4P0CJ87 422 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L5P0CJ88 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L6P0CJ89 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4L7P0CJ90 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 IAH1Q2TAA2 248 aaPredicted RBP13.4□□□□□ -0.26
NR1H3-235ENST00000616973 GGNBP1Q5YKI7 109 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 ZNF880Q6PDB4 577 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 OR1J1Q8NGS3 322 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 OBP2BQ9NPH6 170 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 SDHAF2Q9NX18 166 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 DUX4Q9UBX2 424 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 POLDIP2Q9Y2S7 368 aa13.4□□□□□ -0.26
NR1H3-235ENST00000616973 MBD3L4A6NDZ8 208 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MBD3L3A6NE82 208 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MBD3L5A6NJ08 208 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 DIRAS3O95661 229 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TK1P04183 234 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 UNQ6126/PRO20091Q6UXV3 157 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 LIAT1Q6ZQX7 453 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 Q6ZS92 163 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 WDR86Q86TI4 376 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MBD3L2Q8NHZ7 208 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MRPL30Q8TCC3 161 aaKnown RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 NEK7Q8TDX7 302 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MRPL24Q96A35 216 aaKnown RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF488Q96MN9 340 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 DMRTA2Q96SC8 542 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 GSKIPQ9P0R6 139 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TRAV24A0A0B4J272 114 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TMEM210A6NLX4 147 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 H7C1Q1 480 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 RHBDL1O75783 438 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TNFSF13O75888 250 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TUSC2O75896 110 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 SLC34A2O95436 690 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 CGAP01215 116 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 ACAA1P09110 424 aaPredicted RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 KCNJ3P48549 501 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 ERVS71-1P61550 626 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 RND3P61587 244 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 FOXF2Q12947 444 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 PSG7Q13046 419 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 Q6P435 159 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 LGI3Q8N145 548 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 MSI2Q96DH6 328 aaKnown RBP13.39□□□□□ -0.27
NR1H3-235ENST00000616973 SHARPINQ9H0F6 387 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 TREM2Q9NZC2 230 aa13.39□□□□□ -0.27
NR1H3-235ENST00000616973 FAM186AA6NE01 2351 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 SCTP09683 121 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 DUSP1P28562 367 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 MDH2P40926 338 aaKnown RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 SNTB1Q13884 538 aaKnown RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 P2RY6Q15077 328 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 PAN3Q58A45 887 aaKnown RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 SHEQ5VZ18 495 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 ZNF585AQ6P3V2 769 aa13.38□□□□□ -0.27
NR1H3-235ENST00000616973 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
NR1H3-235ENST00000616973 LDLRAD3Q86YD5 345 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms