RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ZNF43P17038 809 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 HMGA1P17096 107 aaKnown RBP11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC39A11Q8N1S5 342 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 IGSF21Q96ID5 467 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR10A5Q9H207 317 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 RBKSQ9H477 322 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 PIGLQ9Y2B2 252 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 A0A1W2PP55 124 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 WDR1O75083 606 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 UMODP07911 640 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 ADH5P11766 374 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 PRRX1P54821 245 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 SLC35B1P78383 322 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 DOCK9Q9BZ29 2069 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 TRBV6-7A0A0A0MS04 114 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 MELTFP08582 738 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 BLKP51451 505 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 UBE2V1Q13404 147 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 LINC01555Q8NAE3 123 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR11L1Q8NGX0 322 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 SSC5DA1L4H1 1573 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 A0A0G2JMZ2 1700 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 COL11A1P12107 1806 aaPredicted RBP11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 A0A1B0GU03 582 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 GABREP78334 506 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 HIST3H3Q16695 136 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 METRNLQ641Q3 311 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 GCNT2Q8N0V5 402 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 ADAT3Q96EY9 351 aaPredicted RBP11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMED7-TICAM2A0A0A6YYA0 188 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 COX5AP20674 150 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 THBS3P49746 956 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 CST9Q5W186 159 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 PTCRAQ6ISU1 281 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 MRGPRX3Q96LB0 322 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 ANKRD36A6QL64 1941 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 C3orf85A0A1B0GTC6 90 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 VSTM2BA6NLU5 285 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 TNFSF13O75888 250 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 FAHP16930 419 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF17P17021 662 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 APOBEC1P41238 236 aaKnown RBP11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 PLP1P60201 277 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 SOCS4Q8WXH5 440 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 PIGCQ92535 297 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 ST6GALNAC6Q969X2 333 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 FOXQ1Q9C009 403 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 A0A1B0GV72 72 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 BMPR1BO00238 502 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 CBR3O75828 277 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 UTS2O95399 124 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 EGR1P18146 543 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 SEC13P55735 322 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 FFAR4Q5NUL3 377 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 CALHM1Q8IU99 346 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 PCNTO95613 3336 aa11.91□□□□□ -0.5
PPP4R3B-205ENST00000616288 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 C11orf94C9JXX5 98 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 KISS1Q15726 138 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF684Q5T5D7 378 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 LINC01590Q5TEZ4 76 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR10G8Q8NGN5 311 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 TSACCQ96A04 125 aaPredicted RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ALG14Q96F25 216 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ANXA10Q9UJ72 324 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 LOC102723971A0A1B0GUV8 181 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 SPRY1O43609 319 aaPredicted RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF207O43670 478 aaKnown RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZIC2O95409 532 aaPredicted RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 CBLN1P23435 193 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 ZNF117Q03924 483 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 SRSF5Q13243 272 aaKnown RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 Q6ZVH6 145 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 CATSPERDQ86XM0 798 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 PECRQ9BY49 303 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
PPP4R3B-205ENST00000616288 F5P12259 2224 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms