RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZNF735P0CB33 412 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 ASCL1P50553 236 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF92Q03936 586 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 TGIF1Q15583 401 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 AVPI1Q5T686 147 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 UQCC3Q6UW78 93 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 LCN15Q6UWW0 184 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 LHX4Q969G2 390 aa4.91□□□□□ -1.62
SYNCRIP-204ENST00000616122 ATRQ13535 2644 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR5B21A6NL26 309 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF724A8MTY0 619 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 H0YIZ8 118 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 KRASP01116 189 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB5CP51148 216 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR2B8PP59922 312 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 KCNMB1Q16558 191 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 GUK1Q16774 197 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM58AQ8N1B3 248 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 BPIFCQ8NFQ6 507 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 RBMXL1Q96E39 390 aaKnown RBP4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 NRIP2Q9BQI9 281 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 FANCFQ9NPI8 374 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 MED9Q9NWA0 146 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR5AC2Q9NZP5 309 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 AMDHD2Q9Y303 409 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 MMP24Q9Y5R2 645 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 COL4A4P53420 1690 aaPredicted RBP4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR13C7P0DN81 318 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 CBR1P16152 277 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 PTGER4P35408 488 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 GPM6AP51674 278 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 UBE2KP61086 200 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 C17orf78Q8N4C9 275 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 SEPSECSQ9HD40 501 aaKnown RBP4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 C5orf42Q9H799 3197 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 IGLV3-32A0A0A0MS00 114 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 TRGV5A0A0B4J1U4 118 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC22A20A6NK97 555 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM74A7A6NL05 159 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 COX6A1P12074 109 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 CA6P23280 308 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 CTSSP25774 331 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 ARR3P36575 388 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 FLI1Q01543 452 aaPredicted RBP4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 ANKRD55Q3KP44 614 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM74A3Q4VXF1 159 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 SPANXN5Q5MJ07 72 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR5C1Q8NGR4 320 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 CT55Q8WUE5 264 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 DYRK2Q92630 601 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 Q96M66 194 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 TP53TG5Q9Y2B4 290 aa4.9□□□□□ -1.62
SYNCRIP-204ENST00000616122 LOC390937A0A1W2PQ73 354 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 A8MXK9 166 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 SIRPB1O00241 398 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 CA11O75493 328 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 IFNA1P01562 189 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 IGHMP01871 453 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 CCL11P51671 97 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 GUCA2BQ16661 112 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 LTC4SQ16873 150 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 IL34Q6ZMJ4 242 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 RNF144BQ7Z419 303 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM251Q8N6I4 163 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 FBXO17Q96EF6 278 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 TWSG1Q9GZX9 223 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 MPC1Q9Y5U8 109 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 WSB1Q9Y6I7 421 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 URGCP-MRPS24S4R325 110 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 A0A1W2PR80 420 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 UMAD1C9J7I0 102 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 H7C1Q1 480 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 CRYAAP02489 173 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 MECP2P51608 486 aaKnown RBP4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 EDDM3AQ14507 147 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 MIDNQ504T8 468 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM211Q6ICI0 200 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 OR8G2PQ6IF36 304 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 THNSL2Q86YJ6 484 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 FAM89BQ8N5H3 189 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 HEYLQ9NQ87 328 aaPredicted RBP4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 R4GN57 208 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 WDFY4Q6ZS81 3184 aa4.9□□□□□ -1.63
SYNCRIP-204ENST00000616122 TRAV17A0A0B4J275 112 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 CDIPTO14735 213 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZNHIT1O43257 154 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 FCGR3AP08637 254 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 CHATP28329 748 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 HOXA6P31267 233 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 RHOBP62745 196 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 COL19A1Q14993 1142 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 OR2B11Q5JQS5 317 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 CLEC9AQ6UXN8 241 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 Q71RC1 249 aaPredicted RBP4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM123Q8N131 208 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 C2CD4CQ8TF44 421 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 MUCL1Q96DR8 90 aa4.89□□□□□ -1.63
SYNCRIP-204ENST00000616122 TECTBQ96PL2 329 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms