RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 VSTM2LQ96N03 204 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 LRRC61Q9BV99 259 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 SLC26A1Q9H2B4 701 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 TRDCB7Z8K6 153 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 C16orf82Q7Z2V1 217 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 RFESDQ8TAC1 157 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 KLF13Q9Y2Y9 288 aaPredicted RBP16.63■□□□□ 0.25
SPAST-203ENST00000615843 DEFB108AA8MXU0 73 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 CRYAAP02489 173 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 CXCL10P02778 98 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 HOGA1Q86XE5 327 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 ADIPOR1Q96A54 375 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 SF3B6Q9Y3B4 125 aaKnown RBP16.63■□□□□ 0.25
SPAST-203ENST00000615843 LOC102724200A0A096LPH7 203 aaPredicted RBP16.63■□□□□ 0.25
SPAST-203ENST00000615843 CD99P14209 185 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 SRD5A3Q9H8P0 318 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 MRPS18BQ9Y676 258 aaKnown RBP16.63■□□□□ 0.25
SPAST-203ENST00000615843 BRWD1Q9NSI6 2320 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 LIMS1P48059 325 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 H2BFSP57053 126 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 DMRT1Q9Y5R6 373 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 TRGV10A0A0A0MS01 117 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 PABPC1L2AQ5JQF8 200 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 CPEB3Q8NE35 698 aaKnown RBP16.62■□□□□ 0.25
SPAST-203ENST00000615843 ZPLD1Q8TCW7 415 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 CA6P23280 308 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 PPOXP50336 477 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 TMEM230Q96A57 120 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 KLHDC2Q9Y2U9 406 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 PMS2P1A4D2B8 440 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 PRSS12P56730 875 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 OR6X1Q8NH79 312 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 SLC25A38Q96DW6 304 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 PGLYRP3Q96LB9 341 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 BTAF1O14981 1849 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 NEURL1O76050 574 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 CISD3P0C7P0 127 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 KIR3DL2P43630 455 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 CCL11P51671 97 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 SKP2Q13309 424 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 CCL28Q9NRJ3 127 aa16.62■□□□□ 0.25
SPAST-203ENST00000615843 SPAG17Q6Q759 2223 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 PCM1Q15154 2024 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
SPAST-203ENST00000615843 PDE6DO43924 150 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 PITX3O75364 302 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 CYB5R3P00387 301 aaPredicted RBP16.61■□□□□ 0.25
SPAST-203ENST00000615843 CXorf67Q86X51 503 aaPredicted RBP16.61■□□□□ 0.25
SPAST-203ENST00000615843 TMEM167BQ9NRX6 74 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 CDK5RAP2Q96SN8 1893 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 RECKO95980 971 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 BCL2P10415 239 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 HOXA6P31267 233 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 RBPJQ06330 500 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 A0A1W2PR80 420 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 SNURFLB1AK76 121 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 PGA4P0DJD7 388 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 PGA5P0DJD9 388 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 IER3P46695 156 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 TMEM56Q96MV1 263 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 LPAR5Q9H1C0 372 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
SPAST-203ENST00000615843 H1FOOQ8IZA3 346 aaPredicted RBP16.61■□□□□ 0.25
SPAST-203ENST00000615843 PQLC2LA1A4F0 135 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 DIRC3C9JPN6 131 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 ST8SIA5O15466 376 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 GCGP01275 180 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 MGAT2Q10469 447 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 DHRS11Q6UWP2 260 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 RNF133Q8WVZ7 376 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 AHDC1Q5TGY3 1603 aaPredicted RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 FAM87AP0C7U9 286 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 FOXO1Q12778 655 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 MRPL54Q6P161 138 aaKnown RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 ADAT3Q96EY9 351 aaPredicted RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 GNRHR2Q96P88 292 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 SEMA7AO75326 666 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 MMP16P51512 607 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 PRSS27Q9BQR3 290 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 DLEC1Q9Y238 1755 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 CTXND1A0A1B0GTU2 59 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 ZNF207O43670 478 aaKnown RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 OPRK1P41145 380 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 WIPI1Q5MNZ9 446 aaPredicted RBP16.6■□□□□ 0.25
SPAST-203ENST00000615843 OR2T6Q8NHC8 308 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 C10orf35Q96D05 121 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 KCNK7Q9Y2U2 307 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 SIT1Q9Y3P8 196 aa16.6■□□□□ 0.25
SPAST-203ENST00000615843 CENPVL1A0A0U1RR11 272 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 MMP9P14780 707 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 VAX1Q5SQQ9 334 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 VASH2Q86V25 355 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 TMEM251Q8N6I4 163 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 ADAMTS17Q8TE56 1095 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 DTD1Q8TEA8 209 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 SLC7A10Q9NS82 523 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 NAGKQ9UJ70 344 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 C1QL1O75973 258 aa16.59■□□□□ 0.25
SPAST-203ENST00000615843 OR3A1P47881 315 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms