RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 GLRX5Q86SX6 157 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF385AQ96PM9 386 aaKnown RBP8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 PRSS50Q9UI38 385 aa8.5□□□□□ -1.05
TNFRSF9-204ENST00000615230 UPK3AO75631 287 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 CLEC2LP0C7M8 214 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 MUC1P15941 1255 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 HIST2H3AQ71DI3 136 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM179BQ7Z7N9 219 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SUMF1Q8NBK3 374 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZMAT3Q9HA38 289 aaKnown RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 TNFRSF19Q9NS68 423 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 MRM2Q9UI43 246 aaKnown RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 DTX4Q9Y2E6 619 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 IL5P05113 134 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 ELOVL1Q9BW60 279 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC6A13Q9NSD5 602 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 IDI2-AS1Q9NZ38 188 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 PTP4A3O75365 173 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SPP1P10451 314 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SPINK2P20155 84 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 CXorf66Q5JRM2 361 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC16A12Q6ZSM3 486 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 R3HDM4Q96D70 268 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 CXorf58Q96LI9 332 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 A0A0U1RQK1 487 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 FAM221AA4D161 298 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF729A6NN14 1252 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 PAX6P26367 422 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 PHYHD1Q5SRE7 291 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR5AP2Q8NGF4 316 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 ADAMTS17Q8TE56 1095 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 GPR61Q9BZJ8 451 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 NAA60Q9H7X0 242 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 SLC7A10Q9NS82 523 aa8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 CHCHD2Q9Y6H1 151 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF9-204ENST00000615230 CTSDP07339 412 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACAA1P09110 424 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPS27P42677 84 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 EVX1P49640 407 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF66Q6ZN08 573 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 DGAT2L6Q6ZPD8 337 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR8U1Q8NH10 309 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 FRZBQ92765 325 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACY3Q96HD9 319 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 RALYQ9UKM9 306 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 RCL1Q9Y2P8 373 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 TANC1Q9C0D5 1861 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 UMAD1C9J7I0 102 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 AKR7A2O43488 359 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 IGHA1P01876 353 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 UBE2KP61086 200 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 WASHC3Q9Y3C0 194 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 TRBV5-3A0A0A0MS03 114 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 POM121CA8CG34 1229 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR4E1P0C645 316 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 HIST1H1BP16401 226 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM11P17152 192 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 TIMP3P35625 211 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 NAAAQ02083 359 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PXT1Q8NFP0 134 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR1L8Q8NGR8 309 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM208Q9BTX3 173 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PLAC1Q9HBJ0 212 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 UQCC1Q9NVA1 299 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 WNT9BO14905 357 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 NUPL2O15504 423 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 GNG7O60262 68 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 GYPAP02724 150 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PSMB6P28072 239 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPL7L1Q6DKI1 246 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR13C5Q8NGS8 318 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPS4Y2Q8TD47 263 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR51I2Q9H344 312 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 YAE1D1Q9NRH1 226 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 OR7C2O60412 319 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PATE4P0C8F1 98 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 CD40P25942 277 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ACOT7LQ6ZUV0 252 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 ITLN1Q8WWA0 313 aa8.48□□□□□ -1.05
TNFRSF9-204ENST00000615230 CTDSPLO15194 276 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 KCNAB3O43448 404 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 CFDP00746 253 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 FSTP19883 344 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 IZUMO4Q1ZYL8 232 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 DMKNQ6E0U4 476 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 DHRS7BQ6IAN0 325 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 RPUSD3Q6P087 351 aaKnown RBP8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 TMEM104Q8NE00 496 aa8.47□□□□□ -1.05
TNFRSF9-204ENST00000615230 C14orf79Q96F83 325 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms