RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 RPS25P62851 125 aaKnown RBP13.66□□□□□ -0.22
CBWD3-211ENST00000615061 GUCA2AQ02747 115 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 ATXN7L3Q14CW9 347 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-211ENST00000615061 SLC22A6Q4U2R8 563 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 Q6YL49 198 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 LYPD6Q86Y78 171 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 MS4A15Q8N5U1 240 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 Q8NFD4 153 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 OR4D6Q8NGJ1 314 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 OR51T1Q8NGJ9 327 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 C17orf50Q8WW18 174 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 BLOC1S6Q9UL45 172 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 TRAV24A0A0B4J272 114 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 A0A1W2PPH5 198 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 MELTFP08582 738 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF728P0DKX0 622 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 COX7A1P24310 79 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 SAA4P35542 130 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 GLIPR1P48060 266 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 P2RX3P56373 397 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 TPBGQ13641 420 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 NCR3LG1Q68D85 454 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 CEACAM19Q7Z692 300 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 PPP1R35Q8TAP8 253 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 COQ2Q96H96 371 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 MGLLQ99685 303 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 ST3GAL6Q9Y274 331 aa13.65□□□□□ -0.22
CBWD3-211ENST00000615061 hADV38S2A0JD32 116 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 PAX6P26367 422 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 BMXP51813 675 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 ACTG1P63261 375 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 MEF2CQ06413 473 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-211ENST00000615061 MLLT11Q13015 90 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-211ENST00000615061 GPR50Q13585 617 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 TBCEQ15813 527 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-211ENST00000615061 TMEM91Q6ZNR0 172 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 OSR2Q8N2R0 312 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 ZNF714Q96N38 554 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 S100A13Q99584 98 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 IL36GQ9NZH8 169 aa13.64□□□□□ -0.23
CBWD3-211ENST00000615061 MRPS28Q9Y2Q9 187 aaKnown RBP13.64□□□□□ -0.23
CBWD3-211ENST00000615061 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 CPEP16870 476 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 ERP29P30040 261 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 IL13RA2Q14627 380 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 GLIPR1L1Q6UWM5 242 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 CHST4Q8NCG5 386 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 Q9H521 79 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 ACOT13Q9NPJ3 140 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 SF3B6Q9Y3B4 125 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 LINC00312Q9Y6C7 94 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 CLDN34H7C241 214 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 GEMIN2O14893 280 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 MMP23AO75900 390 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 RBM11P57052 281 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 EMX1Q04741 257 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
CBWD3-211ENST00000615061 KRBOX4Q5JUW0 171 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 AWAT2Q6E213 333 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 TRAPPC6BQ86SZ2 158 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 THRSPQ92748 146 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 SLC25A28Q96A46 364 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 AJUBAQ96IF1 538 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
CBWD3-211ENST00000615061 hCG_1809904A0A1W2PP81 198 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 A0A1W2PPE2 198 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 A0A1W2PR64 198 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 A0A1W2PRV1 198 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 OR7C1O76099 320 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-211ENST00000615061 CSN2P05814 226 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 GABARAPL2P60520 117 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 HSD17B12Q53GQ0 312 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 BAIAP2L2Q6UXY1 529 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 CYYR1Q96J86 154 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 HEXA-AS1Q9H8Q6 139 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 TCF7L1Q9HCS4 588 aa13.62□□□□□ -0.23
CBWD3-211ENST00000615061 ODAMA1E959 279 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 UCHL1P09936 223 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 SRMP19623 302 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 SSX1Q16384 188 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 TAF9Q16594 264 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 NHLRC3Q5JS37 347 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 BRICD5Q6PL45 260 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 ZNF367Q7RTV3 350 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 TMEM104Q8NE00 496 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 GCDHQ92947 438 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-211ENST00000615061 BANF2Q9H503 90 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 ZNRD1Q9P1U0 126 aa13.61□□□□□ -0.23
CBWD3-211ENST00000615061 ZNF780AO75290 641 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-211ENST00000615061 FBP1P09467 338 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms