RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 OR13C3Q8NGS6 347 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 RFKQ969G6 155 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 TOMM40LQ969M1 308 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 UTP4Q969X6 686 aaKnown RBP11.85□□□□□ -0.51
CTSA-216ENST00000607212 SPACA5Q96QH8 159 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 INPP5EQ9NRR6 644 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 ODAMA1E959 279 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 BUB1B-PAK6H3BSN5 160 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 HSPB6O14558 160 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 HCKP08631 526 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 HTR1AP08908 422 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 CCDC159P0C7I6 412 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 FASP25445 335 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 GDNFP39905 211 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 GLP1RP43220 463 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 RAB25P57735 213 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 KRTAP10-11P60412 298 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 ATP6AP1Q15904 470 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 LTC4SQ16873 150 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 ZNF329Q86UD4 541 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 OSR2Q8N2R0 312 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 OR13C9Q8NGT0 318 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 SPSB1Q96BD6 273 aa11.84□□□□□ -0.51
CTSA-216ENST00000607212 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
CTSA-216ENST00000607212 AMMECR1Q9Y4X0 333 aaPredicted RBP11.84□□□□□ -0.51
CTSA-216ENST00000607212 IGKV1-9A0A0C4DH69 117 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 DEGS1O15121 323 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 TMEM225BP0DP42 221 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 VSIG8P0DPA2 414 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 ZNF85Q03923 595 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 KDM4DQ6B0I6 523 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 UTS2BQ765I0 119 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 OR2G2Q8NGZ5 317 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 HRASLS5Q96KN8 279 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 NR1H4Q96RI1 486 aaPredicted RBP11.83□□□□□ -0.52
CTSA-216ENST00000607212 CIB1Q99828 191 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 IMPAD1Q9NX62 359 aa11.83□□□□□ -0.52
CTSA-216ENST00000607212 DAPL1A0PJW8 107 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 ZNF729A6NN14 1252 aaPredicted RBP11.82□□□□□ -0.52
CTSA-216ENST00000607212 SERPINE3A8MV23 424 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 SNRNP70P08621 437 aaKnown RBP11.82□□□□□ -0.52
CTSA-216ENST00000607212 TMEM11P17152 192 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 EFNB1P98172 346 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 HNF4GQ14541 408 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 LINC00482Q8N8I6 264 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 OR8J1Q8NGP2 316 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 OR9G1Q8NH87 305 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 CORO2AQ92828 525 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
CTSA-216ENST00000607212 GABARAPL1Q9H0R8 117 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 PCDHB16Q9NRJ7 776 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 OR6C3Q9NZP0 311 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 HHLA2Q9UM44 414 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
CTSA-216ENST00000607212 IGKV1-12A0A0C4DH73 117 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 J3QLW9 94 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 KDM4BO94953 1096 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 IGKV1D-12P01611 117 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 IGLV1-47P01700 117 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 FCGR1AP12314 374 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 ZNF19P17023 458 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 CD34P28906 385 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 POLR2IP36954 125 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 GNG10P50151 68 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 SLC35B1P78383 322 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 TMED1Q13445 227 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 PAN3Q58A45 887 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 C8orf86Q6ZUL3 223 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 CHST4Q8NCG5 386 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 CHPT1Q8WUD6 406 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 EME1Q96AY2 570 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 NOL4LQ96MY1 436 aaPredicted RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 COMMD4Q9H0A8 199 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 PPIL3Q9H2H8 161 aaKnown RBP11.81□□□□□ -0.52
CTSA-216ENST00000607212 LINC00527Q9UJ94 153 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 AP4S1Q9Y587 144 aa11.81□□□□□ -0.52
CTSA-216ENST00000607212 MEIKINA0A087WXM9 373 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 AMY1AP04745 511 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 AMY2AP04746 511 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 LPCAT4Q643R3 524 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 ZNF565Q8N9K5 539 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 RNFT2Q96EX2 444 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 MRPL48Q96GC5 212 aaKnown RBP11.8□□□□□ -0.52
CTSA-216ENST00000607212 COQ2Q96H96 371 aa11.8□□□□□ -0.52
CTSA-216ENST00000607212 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms