RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 RPL35P42766 123 aaKnown RBP12.43□□□□□ -0.42
SMG9-211ENST00000601170 HAAOP46952 286 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 PRDX4Q13162 271 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 GNMTQ14749 295 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 GUK1Q16774 197 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 Q8NFD4 153 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 USB1Q9BQ65 265 aaKnown RBP12.43□□□□□ -0.42
SMG9-211ENST00000601170 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
SMG9-211ENST00000601170 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 IGKV3D-15A0A087WSY6 115 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 NKX2-6A6NCS4 301 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 PRH1P02810 166 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 GPM6AP51674 278 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 COMMD1Q8N668 190 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 THOC3Q96J01 351 aaKnown RBP12.43□□□□□ -0.42
SMG9-211ENST00000601170 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 C19orf12Q9NSK7 152 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 ATPIF1Q9UII2 106 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
SMG9-211ENST00000601170 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 COLCA2A8K830 154 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 TRDCB7Z8K6 153 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 CDS2O95674 445 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 HLA-HP01893 362 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 CELA3AP09093 270 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 AKR1C3P42330 323 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 ASCL1P50553 236 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 SRPXP78539 464 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMG9-211ENST00000601170 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FAM185AQ8N0U4 392 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 POM121Q96HA1 1249 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 SCRT1Q9BWW7 348 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 LINC00470Q9BZP3 86 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 Q9N2K0 584 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 SMCO4Q9NRQ5 59 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 PCP4L1A6NKN8 68 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 SCTP09683 121 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 LHX2P50458 406 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 UCP2P55851 309 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 FGF12P61328 243 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 HMGN3Q15651 99 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 Q6ZS49 121 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 TUSC5Q8IXB3 177 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 SUMF1Q8NBK3 374 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 CDX2Q99626 313 aaPredicted RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 EIF5A2Q9GZV4 153 aaKnown RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 ESRP2Q9H6T0 727 aaKnown RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 ZNF703Q9H7S9 590 aaPredicted RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 CALHM2Q9HA72 323 aa12.42□□□□□ -0.42
SMG9-211ENST00000601170 UBE2J1Q9Y385 318 aaPredicted RBP12.42□□□□□ -0.42
SMG9-211ENST00000601170 CELSR3Q9NYQ7 3312 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
SMG9-211ENST00000601170 ZNF503-AS2A6NEH8 195 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 HSPB6O14558 160 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 NAPSAO96009 420 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 TK1P04183 234 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 ACP1P24666 158 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 KCNJ3P48549 501 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 ZNF818PQ6ZRF7 136 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 MRPL21Q7Z2W9 205 aaKnown RBP12.41□□□□□ -0.42
SMG9-211ENST00000601170 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 ZDHHC23Q8IYP9 409 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 SIGLEC12Q96PQ1 595 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 GPHA2Q96T91 129 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
SMG9-211ENST00000601170 NEURL1O76050 574 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
SMG9-211ENST00000601170 RAB5CP51148 216 aa12.41□□□□□ -0.42
SMG9-211ENST00000601170 POLR2GP62487 172 aaKnown RBP eCLIP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms