RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ALKBH1Q13686 389 aaKnown RBP13.59□□□□□ -0.23
SCAF1-204ENST00000601038 CENPVQ7Z7K6 275 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-204ENST00000601038 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 OR5D18Q8NGL1 313 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 SGCDQ92629 289 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 MRPL48Q96GC5 212 aaKnown RBP13.59□□□□□ -0.23
SCAF1-204ENST00000601038 C4orf36Q96KX1 117 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-204ENST00000601038 ZCCHC4Q9H5U6 513 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 NECAP2Q9NVZ3 263 aa13.59□□□□□ -0.23
SCAF1-204ENST00000601038 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-204ENST00000601038 A0A087X0M5 115 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 A0A1B0GX30 115 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
SCAF1-204ENST00000601038 CD24P25063 80 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 GDNFP39905 211 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 CEACAM3P40198 252 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 PRRX1P54821 245 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 KRBOX4Q5JUW0 171 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 Q6P435 159 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 OR4D6Q8NGJ1 314 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 CAPSLQ8WWF8 208 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 PHF21AQ96BD5 680 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 COQ2Q96H96 371 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 SLC25A33Q9BSK2 321 aa13.58□□□□□ -0.24
SCAF1-204ENST00000601038 A0A1W2PRX2 142 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 BUB1B-PAK6H3BSN5 160 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 SLC33A1O00400 549 aaPredicted RBP13.57□□□□□ -0.24
SCAF1-204ENST00000601038 TOR1AO14656 332 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 EI24O14681 340 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 DEGS1O15121 323 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 OR2F2O95006 317 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 TMEM225BP0DP42 221 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 PTGFRP43088 359 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 ALDH3A2P51648 485 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 LOXL3P58215 753 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 GALEQ14376 348 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 CDK5R1Q15078 307 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 HLA-DRB5Q30154 266 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 ZIK1Q3SY52 487 aaPredicted RBP13.57□□□□□ -0.24
SCAF1-204ENST00000601038 ABCA11PQ4W5N1 156 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 LHFPL3Q86UP9 236 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 OR5D14Q8NGL3 314 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 MRAPQ8TCY5 172 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 LGALS12Q96DT0 336 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 RBM14Q96PK6 669 aaKnown RBP13.57□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF286AQ9HBT8 521 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 MYRFQ9Y2G1 1151 aa13.57□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF729A6NN14 1252 aaPredicted RBP13.56□□□□□ -0.24
SCAF1-204ENST00000601038 OOSP1A8MZH6 123 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 LY6LH3BQJ8 138 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 LPLP06858 475 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 DBTP11182 482 aaKnown RBP13.56□□□□□ -0.24
SCAF1-204ENST00000601038 CD33P20138 364 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 ZP1P60852 638 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 KISS1Q15726 138 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 TPTE2P1Q5T6R2 138 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 CCDC144NLQ6NUI1 221 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 SYS1Q8N2H4 156 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 PARP16Q8N5Y8 322 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 ALG8Q9BVK2 526 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 ING3Q9NXR8 418 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 OR6C3Q9NZP0 311 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 AASSQ9UDR5 926 aa13.56□□□□□ -0.24
SCAF1-204ENST00000601038 KBTBD11-OT1A0A1B0GTJ5 212 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 TCRBV4S1A1TA0A5B7 111 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 M0QZK8 103 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 SULT1B1O43704 296 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 ZFPL1O95159 310 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 AMY1AP04745 511 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 AMY2AP04746 511 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 HCKP08631 526 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 CGB3P0DN86 165 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 CGB7P0DN87 165 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 GABRB1P18505 474 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 MNDAP41218 407 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 MTNR1BP49286 362 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 ATXN7L3Q14CW9 347 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-204ENST00000601038 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 ELP2Q6IA86 826 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF565Q8N9K5 539 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 OR51T1Q8NGJ9 327 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 NCOR1P1Q9H4R4 102 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 ISG20L2Q9H9L3 353 aaKnown RBP13.55□□□□□ -0.24
SCAF1-204ENST00000601038 AURKAIP1Q9NWT8 199 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-204ENST00000601038 GMPPBQ9Y5P6 360 aa13.55□□□□□ -0.24
SCAF1-204ENST00000601038 TSSC4Q9Y5U2 329 aaPredicted RBP13.55□□□□□ -0.24
SCAF1-204ENST00000601038 TMEM212A6NML5 194 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 H3BNX3 289 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 FADS2O95864 444 aaKnown RBP13.54□□□□□ -0.24
SCAF1-204ENST00000601038 PF4V1P10720 104 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 OR3A4PP47883 348 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 MRPL28Q13084 256 aaKnown RBP13.54□□□□□ -0.24
SCAF1-204ENST00000601038 UTF1Q5T230 341 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF691Q5VV52 312 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms