RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 C1orf229Q6ZS94 237 aaPredicted RBP15.96■□□□□ 0.15
UPF1-209ENST00000600310 GDPD3Q7L5L3 318 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 OR2W3Q7Z3T1 314 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 FAM46BQ96A09 425 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 Q96M66 194 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 SELENOIQ9C0D9 397 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 C19orf12Q9NSK7 152 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 LPAR3Q9UBY5 353 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 AUP1Q9Y679 476 aa15.96■□□□□ 0.15
UPF1-209ENST00000600310 NAV3Q8IVL0 2385 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 TLN2Q9Y4G6 2542 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A10PA6NDY2 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A18PA6NE21 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A16PA6NEW6 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A20PA6NIJ5 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A8PA6NJQ4 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A7PA6NKC0 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A22PA8MWA6 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A12PA8MX19 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A5PA8MXJ8 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A23PA8MXZ1 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 AIPO00170 330 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 MPIG6BO95866 241 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A15PP0C7V4 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A13PP0C7W8 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A14PP0C7W9 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM90A24PP0C7X0 464 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 HNF1AP20823 631 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 ERP29P30040 261 aaKnown RBP15.95■□□□□ 0.14
UPF1-209ENST00000600310 CLDN12P56749 244 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 RPL31P62899 125 aaKnown RBP15.95■□□□□ 0.14
UPF1-209ENST00000600310 UNC119Q13432 240 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 C2orf76Q3KRA6 126 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 GPR141Q7Z602 305 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 OR4M1Q8NGD0 313 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 OR51D1Q8NGF3 324 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FAM3DQ96BQ1 224 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 PPA2Q9H2U2 334 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 KCNK15Q9H427 330 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 ZNF581Q9P0T4 197 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 FBLN5Q9UBX5 448 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 CDC42EP3Q9UKI2 254 aa15.95■□□□□ 0.14
UPF1-209ENST00000600310 A0A1W2PQ09 198 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 SMIM30A4D0T7 59 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 HOXB4P17483 251 aaPredicted RBP15.94■□□□□ 0.14
UPF1-209ENST00000600310 EDDM3BP56851 147 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 LSM3P62310 102 aaKnown RBP15.94■□□□□ 0.14
UPF1-209ENST00000600310 EDDM3AQ14507 147 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 PAN3Q58A45 887 aaKnown RBP15.94■□□□□ 0.14
UPF1-209ENST00000600310 TMEM200BQ69YZ2 307 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 ANKRD13BQ86YJ7 626 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 FAM185AQ8N0U4 392 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 TEX29Q8N6K0 151 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 TM2D1Q9BX74 207 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 TMEM59Q9BXS4 323 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 KPTNQ9Y664 436 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 ZANQ9Y493 2812 aa15.94■□□□□ 0.14
UPF1-209ENST00000600310 FUOMA2VDF0 154 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 LDLRAD4O15165 306 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 CRLF1O75462 422 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 CLEC2LP0C7M8 214 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 MMP9P14780 707 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 RPL5P46777 297 aaKnown RBP15.93■□□□□ 0.14
UPF1-209ENST00000600310 KCNJ3P48549 501 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 P2RX3P56373 397 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 ARF6P62330 175 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 RPS27AP62979 156 aaKnown RBP15.93■□□□□ 0.14
UPF1-209ENST00000600310 MXD1Q05195 221 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 MEF2CQ06413 473 aaPredicted RBP15.93■□□□□ 0.14
UPF1-209ENST00000600310 KIR3DL3Q8N743 410 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 SUMF2Q8NBJ7 301 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 UPRTQ96BW1 309 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 WDFY2Q96P53 400 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 DPCDQ9BVM2 203 aaPredicted RBP15.93■□□□□ 0.14
UPF1-209ENST00000600310 BEX2Q9BXY8 128 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 SIRPDQ9H106 197 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 SPACA1Q9HBV2 294 aa15.93■□□□□ 0.14
UPF1-209ENST00000600310 RCC2Q9P258 522 aaKnown RBP15.93■□□□□ 0.14
UPF1-209ENST00000600310 H3BUI4 141 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 HSPB6O14558 160 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 GABARAPO95166 117 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 TGFBR1P36897 503 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 PAX5Q02548 391 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 CHRFAM7AQ494W8 412 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 ATAD3CQ5T2N8 411 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 METTL11BQ5VVY1 283 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 GPR107Q5VW38 600 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 SIGIRRQ6IA17 410 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 SFXN4Q6P4A7 337 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 METAP1DQ6UB28 335 aaPredicted RBP15.92■□□□□ 0.14
UPF1-209ENST00000600310 SLC16A12Q6ZSM3 486 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 IL17RELQ6ZVW7 336 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 CMTM4Q8IZR5 234 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 BPIFB2Q8N4F0 458 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 COQ2Q96H96 371 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 URM1Q9BTM9 101 aaKnown RBP15.92■□□□□ 0.14
UPF1-209ENST00000600310 LIN7BQ9HAP6 207 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 ONECUT1Q9UBC0 465 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 SCOCQ9UIL1 159 aa15.92■□□□□ 0.14
UPF1-209ENST00000600310 WNK2Q9Y3S1 2297 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms