RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	MIXL1	Q9H2W2	232 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	IFT22	Q9H7X7	185 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	MIOX	Q9UGB7	285 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026	ZNF222	Q9UK12	451 aa		18.28	■□□□□ 0.52
LTBP4-227	ENST00000600026		A0A0A6YYD4	124 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	SIRPB1	O00241	398 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR2H2	O95918	312 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	ZNF16	P17020	682 aa	Predicted RBP	18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	FUT3	P21217	361 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	CEBPD	P49716	269 aa	Predicted RBP	18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	SEC61A1	P61619	476 aa	Known RBP	18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	COL10A1	Q03692	680 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	PDCD1	Q15116	288 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026		Q6P435	159 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	SLC36A1	Q7Z2H8	476 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	CD177	Q8N6Q3	437 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	OR6Q1	Q8NGQ2	317 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	NEIL1	Q96FI4	390 aa	Predicted RBP	18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	MED30	Q96HR3	178 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	CCL13	Q99616	98 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	CTSZ	Q9UBR2	303 aa		18.27	■□□□□ 0.52
LTBP4-227	ENST00000600026	SOCS1	O15524	211 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	ADAM20	O43506	726 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	PDCD6	O75340	191 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	TFF1	P04155	84 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	WNT2	P09544	360 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	ARL6IP1	Q15041	203 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	NKAPL	Q5M9Q1	402 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	METAP1D	Q6UB28	335 aa	Predicted RBP	18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNF788	Q6ZQV5	615 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026		Q6ZTK2	550 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	ZNF561	Q8N587	486 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	OR8B3	Q8NGG8	313 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	PPP1R35	Q8TAP8	253 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	RAB3C	Q96E17	227 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	SDSL	Q96GA7	329 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	DIRAS2	Q96HU8	199 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	WDFY2	Q96P53	400 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	OR8B2	Q96RD0	313 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	NUDT16L1	Q9BRJ7	211 aa	Known RBP	18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026	EXTL2	Q9UBQ6	330 aa		18.26	■□□□□ 0.51
LTBP4-227	ENST00000600026		A0A1B0GW55	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	RAB27B	O00194	218 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	GLA	P06280	429 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L2	P0CJ85	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L3	P0CJ86	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L4	P0CJ87	422 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L5	P0CJ88	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L6	P0CJ89	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L7	P0CJ90	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	AMY2B	P19961	511 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	CDK2	P24941	298 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	LMO1	P25800	156 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	IL13RA1	P78552	427 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	RBM39	Q14498	530 aa	Known RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	PAN3	Q58A45	887 aa	Known RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4L9	Q6RFH8	374 aa	Predicted RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	NLRC3	Q7RTR2	1065 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	BIVM	Q86UB2	503 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	ASCC1	Q8N9N2	400 aa	Known RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	MSI2	Q96DH6	328 aa	Known RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	GAFA1	Q96PS6	74 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	PLEKHJ1	Q9NW61	149 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	RCC2	Q9P258	522 aa	Known RBP	18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	KAAG1	Q9UBP8	84 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	DUX4	Q9UBX2	424 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	ACAN	P16112	2415 aa		18.25	■□□□□ 0.51
LTBP4-227	ENST00000600026	MCRIP1	C9JLW8	97 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	SLC33A1	O00400	549 aa	Predicted RBP	18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	SIGLEC5	O15389	551 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	TMPRSS2	O15393	492 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	XRCC3	O43542	346 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	CHAT	P28329	748 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	TNFSF8	P32971	234 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	MOGAT2	Q3SYC2	334 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	TMEM69	Q5SWH9	247 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	CYB5R2	Q6BCY4	276 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	SIGIRR	Q6IA17	410 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	CNIH2	Q6PI25	160 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	BAIAP2L2	Q6UXY1	529 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	LINC00299	Q6ZSB3	139 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	FAM216B	Q8N7L0	139 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	LINC01356	Q8N9X3	169 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	SUMF2	Q8NBJ7	301 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	NEK7	Q8TDX7	302 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	SNX22	Q96L94	193 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	DPCD	Q9BVM2	203 aa	Predicted RBP	18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	LPAR2	Q9HBW0	351 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	HSF4	Q9ULV5	492 aa		18.24	■□□□□ 0.51
LTBP4-227	ENST00000600026	DOCK11	Q5JSL3	2073 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	TRAV18	A0A075B6X5	111 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	TRAV24	A0A0B4J272	114 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	FOXI3	A8MTJ6	420 aa	Predicted RBP	18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	CD5L	O43866	347 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	LY6G6D	O95868	133 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	TMEM50B	P56557	158 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	ESCO2	Q56NI9	601 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	OR4M1	Q8NGD0	313 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	OR5D13	Q8NGL4	314 aa		18.23	■□□□□ 0.51
LTBP4-227	ENST00000600026	ARHGAP5-AS1	Q96IT6	56 aa		18.23	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms