RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 CHST1O43916 411 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 ARG1P05089 322 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 HCKP08631 526 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 HSMCR30P0CW71 290 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 RBP2P50120 134 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 ATP1B3P54709 279 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 TAS2R43P59537 309 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 SPHARQ15513 63 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 PLA1AQ53H76 456 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 LHFPL4Q7Z7J7 247 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 C1QL4Q86Z23 238 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 SERPINA12Q8IW75 414 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 PARP16Q8N5Y8 322 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 KLHDC1Q8N7A1 406 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 OR13D1Q8NGV5 346 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 TMEM106AQ96A25 262 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 FOXRED1Q96CU9 486 aaPredicted RBP15.17■□□□□ 0.02
PNKP-213ENST00000599543 OR14A2Q96R54 314 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 MTCH1Q9NZJ7 389 aa15.17■□□□□ 0.02
PNKP-213ENST00000599543 TBL2Q9Y4P3 447 aaKnown RBP15.17■□□□□ 0.02
PNKP-213ENST00000599543 TRBV5-5A0A0J9YX44 114 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 MEX3AA1L020 520 aaKnown RBP15.16■□□□□ 0.02
PNKP-213ENST00000599543 VGLL3A8MV65 326 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 SULT1B1O43704 296 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 ZNF737O75373 536 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 RBP4P02753 201 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 ZNF728P0DKX0 622 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 PRKACBP22694 351 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 SNU13P55769 128 aaKnown RBP15.16■□□□□ 0.02
PNKP-213ENST00000599543 DLX6P56179 175 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 RNLSQ5VYX0 342 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 OR8H2Q8N162 312 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 C11orf44Q8N8P7 122 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 OR5D14Q8NGL3 314 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 EMG1Q92979 244 aaKnown RBP15.16■□□□□ 0.02
PNKP-213ENST00000599543 TMED9Q9BVK6 235 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 NEK6Q9HC98 313 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 ABCB10Q9NRK6 738 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 IL36RNQ9UBH0 155 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 FOXJ3Q9UPW0 622 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 PLXNB1O43157 2135 aa15.16■□□□□ 0.02
PNKP-213ENST00000599543 FAM90A8PA6NJQ4 464 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 VSIG10L2P0DP72 767 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 BCL3P20749 454 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 NPBWR2P48146 333 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 FAM189A2Q15884 450 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 LHFPL2Q6ZUX7 228 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 PRSS48Q7RTY5 328 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 SATL1Q86VE3 508 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 Q8IYB0 196 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 DNAAF1Q8NEP3 725 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 PIFOQ8TCI5 191 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 SPSB1Q96BD6 273 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 ZNF714Q96N38 554 aa15.15■□□□□ 0.02
PNKP-213ENST00000599543 TRAV8-7A0A075B6U6 113 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 IGKV1-12A0A0C4DH73 117 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 A0A0G2JK05 382 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 MAGEA13PA6NCF6 341 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 ODF3BA8MYP8 253 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 HAND1O96004 215 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 IGKV1D-12P01611 117 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 CD2P06729 351 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 IGHV1-8P0DP01 117 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 DYNC1I2Q13409 638 aaKnown RBP15.14■□□□□ 0.01
PNKP-213ENST00000599543 SSX2Q16385 188 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 LIPKQ5VXJ0 399 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 ZNF626Q68DY1 528 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 OR52N4Q8NGI2 321 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 TMEM203Q969S6 136 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 MALSU1Q96EH3 234 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 SNX22Q96L94 193 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 RBFOX1Q9NWB1 397 aaKnown RBP15.14■□□□□ 0.01
PNKP-213ENST00000599543 PITPNC1Q9UKF7 332 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 BLOC1S6Q9UL45 172 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 TCF19Q9Y242 345 aa15.14■□□□□ 0.01
PNKP-213ENST00000599543 hADV38S2A0JD32 116 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 CYB5AP00167 134 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 RAB3AP20336 220 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 GABRR1P24046 479 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 RAB13P51153 203 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 MEF2CQ06413 473 aaPredicted RBP15.13■□□□□ 0.01
PNKP-213ENST00000599543 PDZK1IP1Q13113 114 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 Q499Y3 187 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 YIF1BQ5BJH7 314 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 FAM27D1Q5T7N8 215 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 HIST2H2BDQ6DRA6 164 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 DYNAPQ8N1N2 210 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 OR11H6Q8NGC7 330 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 CFHR4Q92496 578 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 KIAA2026Q5HYC2 2103 aa15.13■□□□□ 0.01
PNKP-213ENST00000599543 NOTCH3Q9UM47 2321 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 TRBV5-7A0A0A0MS05 114 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 TMEM82A0PJX8 343 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 PIN1P1O15428 100 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 OPN1MWP04001 364 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 OPN1MW2P0DN77 364 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 OPN1MW3P0DN78 364 aa15.12■□□□□ 0.01
PNKP-213ENST00000599543 TMEM225BP0DP42 221 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms