RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CALCBP10092 127 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 ZNF20P17024 532 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 HOXD3P31249 432 aaPredicted RBP16.81■□□□□ 0.28
PNKP-212ENST00000599454 ATP6V1E1P36543 226 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 KIR3DL2P43630 455 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 GLIPR1P48060 266 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 ISL1P61371 349 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 AESQ08117 197 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 THNSL2Q86YJ6 484 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 MRPL41Q8IXM3 137 aaKnown RBP16.81■□□□□ 0.28
PNKP-212ENST00000599454 CHST4Q8NCG5 386 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 GABARAPL1Q9H0R8 117 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 ZMAT5Q9UDW3 170 aaKnown RBP16.81■□□□□ 0.28
PNKP-212ENST00000599454 GNG8Q9UK08 70 aa16.81■□□□□ 0.28
PNKP-212ENST00000599454 FAM172BPA6NC97 362 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 SH2D7A6NKC9 451 aaPredicted RBP16.8■□□□□ 0.28
PNKP-212ENST00000599454 KDM4BO94953 1096 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 ISG15P05161 165 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 OCM2P0CE71 109 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 OCMP0CE72 109 aaPredicted RBP16.8■□□□□ 0.28
PNKP-212ENST00000599454 GDNFP39905 211 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 ATP6AP1Q15904 470 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 RDH10Q8IZV5 341 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 RFKQ969G6 155 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 ZNF649Q9BS31 505 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 OR6C3Q9NZP0 311 aa16.8■□□□□ 0.28
PNKP-212ENST00000599454 AMMECR1Q9Y4X0 333 aaPredicted RBP16.8■□□□□ 0.28
PNKP-212ENST00000599454 DNAH9Q9NYC9 4486 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 APOL3O95236 402 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 ZNF44P15621 663 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 OR3A4PP47883 348 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 THBS3P49746 956 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 RPL23AP62750 156 aaKnown RBP16.79■□□□□ 0.28
PNKP-212ENST00000599454 KRBOX4Q5JUW0 171 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 ZDHHC13Q8IUH4 622 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 SAXO1Q8IYX7 474 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 OR8J1Q8NGP2 316 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 OR2G2Q8NGZ5 317 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 OR9G1Q8NH87 305 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 CHPT1Q8WUD6 406 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 RPEQ96AT9 228 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 FGGYQ96C11 551 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 MBOAT4Q96T53 435 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 NEK6Q9HC98 313 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 ZFP57Q9NU63 452 aa16.79■□□□□ 0.28
PNKP-212ENST00000599454 IGKV1-12A0A0C4DH73 117 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A18PA6NE21 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A16PA6NEW6 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A20PA6NIJ5 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A9PA6NNJ1 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A12PA8MX19 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A5PA8MXJ8 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 IGKV1D-12P01611 117 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 MT-ND2P03891 347 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A15PP0C7V4 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A13PP0C7W8 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A14PP0C7W9 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 FAM90A24PP0C7X0 464 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 ZNF85Q03923 595 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 RBM39Q14498 530 aaKnown RBP16.78■□□□□ 0.28
PNKP-212ENST00000599454 TP53I3Q53FA7 332 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 KCTD20Q7Z5Y7 419 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 COQ2Q96H96 371 aa16.78■□□□□ 0.28
PNKP-212ENST00000599454 MYCNOSP40205 109 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 C17orf58Q2M2W7 97 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 Q6P435 159 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 FDX2Q6P4F2 183 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 UNQ9370/PRO34162Q6UXP9 181 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 TOMM40LQ969M1 308 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 RNF166Q96A37 237 aaPredicted RBP16.77■□□□□ 0.28
PNKP-212ENST00000599454 RFT1Q96AA3 541 aa16.77■□□□□ 0.28
PNKP-212ENST00000599454 KBTBD11-OT1A0A1B0GTJ5 212 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
PNKP-212ENST00000599454 FGF16O43320 207 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 VSIG8P0DPA2 414 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 SCN1BQ07699 218 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 OR2W3Q7Z3T1 314 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 ZNF329Q86UD4 541 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 COMMD1Q8N668 190 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 KIRREL1Q96J84 757 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 CIB1Q99828 191 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 NCOR1P1Q9H4R4 102 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 FRRS1LQ9P0K9 344 aa16.76■□□□□ 0.27
PNKP-212ENST00000599454 DEGS1O15121 323 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
PNKP-212ENST00000599454 NFYBP25208 207 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 FASP25445 335 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 CCR9P51686 369 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 GP2P55259 537 aaKnown RBP16.75■□□□□ 0.27
PNKP-212ENST00000599454 SLC35B1P78383 322 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 ATXN7L3Q14CW9 347 aaPredicted RBP16.75■□□□□ 0.27
PNKP-212ENST00000599454 ZNF565Q8N9K5 539 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 OR5D18Q8NGL1 313 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 EME1Q96AY2 570 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 GABARAPL3Q9BY60 117 aa16.75■□□□□ 0.27
PNKP-212ENST00000599454 NUDT19A8MXV4 375 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 J3QR06 171 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 CGB3P0DN86 165 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 CGB7P0DN87 165 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms