RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 PPP1R35Q8TAP8 253 aa18.59■□□□□ 0.57
IRF3-220ENST00000598108 TMED9Q9BVK6 235 aa18.59■□□□□ 0.57
IRF3-220ENST00000598108 CCDC90BQ9GZT6 254 aa18.59■□□□□ 0.57
IRF3-220ENST00000598108 HEXA-AS1Q9H8Q6 139 aa18.59■□□□□ 0.57
IRF3-220ENST00000598108 ZNF581Q9P0T4 197 aa18.59■□□□□ 0.57
IRF3-220ENST00000598108 hCG_1809904A0A1W2PP81 198 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 A0A1W2PPE2 198 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 A0A1W2PR64 198 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 A0A1W2PRV1 198 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 hADV38S2A0JD32 116 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 IGHV4-59P01825 116 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 MAS1P04201 325 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 COX7A1P24310 79 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 IER3P46695 156 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 GLIPR1P48060 266 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 AESQ08117 197 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 RBM48Q5RL73 367 aaKnown RBP18.58■□□□□ 0.56
IRF3-220ENST00000598108 FAM27D1Q5T7N8 215 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 PRSS48Q7RTY5 328 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 LYPD6Q86Y78 171 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 LDLRAD3Q86YD5 345 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 CHST4Q8NCG5 386 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 CHIAQ9BZP6 476 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 METTL9Q9H1A3 318 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 IL36GQ9NZH8 169 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 LINC00312Q9Y6C7 94 aa18.58■□□□□ 0.56
IRF3-220ENST00000598108 TRAV24A0A0B4J272 114 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 HKR1P10072 659 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 COMPP49747 757 aaPredicted RBP18.57■□□□□ 0.56
IRF3-220ENST00000598108 LIPKQ5VXJ0 399 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 MS4A15Q8N5U1 240 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 TMEM86BQ8N661 226 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 SSMEM1Q8WWF3 244 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 COQ2Q96H96 371 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 ZNF714Q96N38 554 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 PPIL3Q9H2H8 161 aaKnown RBP18.57■□□□□ 0.56
IRF3-220ENST00000598108 ING3Q9NXR8 418 aa18.57■□□□□ 0.56
IRF3-220ENST00000598108 A0A1W2PP11 408 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 HSPB6O14558 160 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 FBP1P09467 338 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 HSMCR30P0CW71 290 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 IGHV1-8P0DP01 117 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 GPR50Q13585 617 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 TPBGQ13641 420 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 IL13RA2Q14627 380 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 MIDNQ504T8 468 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 C12orf54Q6X4T0 127 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 JAGN1Q8N5M9 183 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 TMEM203Q969S6 136 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 MUL1Q969V5 352 aa18.56■□□□□ 0.56
IRF3-220ENST00000598108 RRP15Q9Y3B9 282 aaKnown RBP18.56■□□□□ 0.56
IRF3-220ENST00000598108 MMP23AO75900 390 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 RBP4P02753 201 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 CSN2P05814 226 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 SERPINA2P20848 420 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 PAX6P26367 422 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 MAPK3P27361 379 aaPredicted RBP18.55■□□□□ 0.56
IRF3-220ENST00000598108 ATXN7L3Q14CW9 347 aaPredicted RBP18.55■□□□□ 0.56
IRF3-220ENST00000598108 SLC22A6Q4U2R8 563 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 OSR2Q8N2R0 312 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 UFD1Q92890 307 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 ZNRD1Q9P1U0 126 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 ST3GAL6Q9Y274 331 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 POMT1Q9Y6A1 747 aa18.55■□□□□ 0.56
IRF3-220ENST00000598108 TENM1Q9UKZ4 2725 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 ODAMA1E959 279 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 FAM181BA6NEQ2 426 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 SC5DO75845 299 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 RBM11P57052 281 aaKnown RBP18.54■□□□□ 0.56
IRF3-220ENST00000598108 AWAT1Q58HT5 328 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 NHLRC3Q5JS37 347 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 KRBOX4Q5JUW0 171 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 GLIPR1L1Q6UWM5 242 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 CEACAM19Q7Z692 300 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 CDH26Q8IXH8 852 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 OR4D6Q8NGJ1 314 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 CORO2AQ92828 525 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 S100A13Q99584 98 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 ISYNA1Q9NPH2 558 aa18.54■□□□□ 0.56
IRF3-220ENST00000598108 MRPS28Q9Y2Q9 187 aaKnown RBP18.54■□□□□ 0.56
IRF3-220ENST00000598108 UBE2J1Q9Y385 318 aaPredicted RBP18.54■□□□□ 0.56
IRF3-220ENST00000598108 GEMIN2O14893 280 aaKnown RBP18.53■□□□□ 0.56
IRF3-220ENST00000598108 DENRO43583 198 aaKnown RBP18.53■□□□□ 0.56
IRF3-220ENST00000598108 PAHP00439 452 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 CSTBP04080 98 aaKnown RBP18.53■□□□□ 0.56
IRF3-220ENST00000598108 RPS25P62851 125 aaKnown RBP18.53■□□□□ 0.56
IRF3-220ENST00000598108 TAF9Q16594 264 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 PAN3Q58A45 887 aaKnown RBP18.53■□□□□ 0.56
IRF3-220ENST00000598108 BAIAP2L2Q6UXY1 529 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 TRAPPC6BQ86SZ2 158 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 LRRTM1Q86UE6 522 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 THRSPQ92748 146 aa18.53■□□□□ 0.56
IRF3-220ENST00000598108 TRGV10A0A0A0MS01 117 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 FUOMA2VDF0 154 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 CPEP16870 476 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 MLLT11Q13015 90 aaPredicted RBP18.52■□□□□ 0.56
IRF3-220ENST00000598108 LDLRAD2Q5SZI1 272 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 TMEM91Q6ZNR0 172 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 LHFPL4Q7Z7J7 247 aa18.52■□□□□ 0.56
IRF3-220ENST00000598108 BEND2Q8NDZ0 799 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms