RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 CHST4Q8NCG5 386 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 OR51A2Q8NGJ7 313 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 RPS4Y2Q8TD47 263 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 NR1H4Q96RI1 486 aaPredicted RBP12.16□□□□□ -0.46
LIG1-215ENST00000597901 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 NPFFR1Q9GZQ6 430 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
LIG1-215ENST00000597901 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 TAS2R4Q9NYW5 299 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 TAS2R3Q9NYW6 316 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
LIG1-215ENST00000597901 TCF19Q9Y242 345 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 HILPDAQ9Y5L2 63 aa12.16□□□□□ -0.46
LIG1-215ENST00000597901 ODAMA1E959 279 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 ALDOBP05062 364 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 CSN2P05814 226 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 JUNBP17275 347 aaPredicted RBP12.15□□□□□ -0.46
LIG1-215ENST00000597901 CDK2P24941 298 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 DYNLT3P51808 116 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 KRBOX4Q5JUW0 171 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 BAIAP2L2Q6UXY1 529 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 HEPN1Q6WQI6 88 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 SETD9Q8NE22 299 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 Q8NFD4 153 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 NDNFQ8TB73 568 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 TNFAIP8L1Q8WVP5 186 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 GGHQ92820 318 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 COQ2Q96H96 371 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 GPER1Q99527 375 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 NKX3-1Q99801 234 aaPredicted RBP12.15□□□□□ -0.46
LIG1-215ENST00000597901 MMP27Q9H306 513 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 CHCHD3Q9NX63 227 aaKnown RBP12.15□□□□□ -0.46
LIG1-215ENST00000597901 ZNF281Q9Y2X9 895 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 EXOSC1Q9Y3B2 195 aaKnown RBP12.15□□□□□ -0.46
LIG1-215ENST00000597901 PKD1L1Q8TDX9 2849 aa12.15□□□□□ -0.46
LIG1-215ENST00000597901 GABRPO00591 440 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 LALBAP00709 142 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 CD2P06729 351 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 MYL12AP19105 171 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 HTR1DP28221 377 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 GDNFP39905 211 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 SLC34A1Q06495 639 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 HERPUD1Q15011 391 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 RCN1Q15293 331 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
LIG1-215ENST00000597901 PRAMEF5Q5TYX0 476 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 RTN4RL2Q86UN3 420 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 TMEM219Q86XT9 240 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 GHSRQ92847 366 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 CPNE2Q96FN4 548 aaPredicted RBP12.14□□□□□ -0.47
LIG1-215ENST00000597901 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 ING4Q9UNL4 249 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 FOXJ3Q9UPW0 622 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 HSPE1-MOB4S4R3N1 261 aa12.14□□□□□ -0.47
LIG1-215ENST00000597901 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 FAM90A22PA8MWA6 464 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 H0YJX3 145 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 HTR3BO95264 441 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 CGB3P0DN86 165 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 CGB7P0DN87 165 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 PTGFRP43088 359 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 BDH1Q02338 343 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 MED21Q13503 144 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 RSU1Q15404 277 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 C17orf58Q2M2W7 97 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 DMKNQ6E0U4 476 aaPredicted RBP12.13□□□□□ -0.47
LIG1-215ENST00000597901 Q6ZTK2 550 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 ZNF565Q8N9K5 539 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 ZNF485Q8NCK3 441 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 OR4P4Q8NGL7 312 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 OR10K1Q8NGX5 313 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 ORAI1Q96D31 301 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 BARHL1Q9BZE3 327 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 PPIL3Q9H2H8 161 aaKnown RBP12.13□□□□□ -0.47
LIG1-215ENST00000597901 ZNF702PQ9H963 129 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 TMEM138Q9NPI0 162 aa12.13□□□□□ -0.47
LIG1-215ENST00000597901 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
LIG1-215ENST00000597901 CDRT1O95170 752 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 CD34P28906 385 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 BLCAPP62952 87 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 ATXN7L3Q14CW9 347 aaPredicted RBP12.12□□□□□ -0.47
LIG1-215ENST00000597901 LAIR2Q6ISS4 152 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 Q8N2B8 174 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 KLHDC1Q8N7A1 406 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 C11orf44Q8N8P7 122 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms