RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LCN2P80188 198 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 PDCD1Q15116 288 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 MICBQ29980 383 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 MOGAT2Q3SYC2 334 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 CNIH2Q6PI25 160 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 LINC00596Q86U02 117 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 OR56B1Q8NGI3 324 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 DIRAS2Q96HU8 199 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 CCL13Q99616 98 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 DIABLOQ9NR28 239 aa12.47□□□□□ -0.41
TRIM28-207ENST00000597136 A0A0A6YYH2 397 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A10PA6NDY2 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A18PA6NE21 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A16PA6NEW6 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A20PA6NIJ5 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 A6NJ64 397 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A7PA6NKC0 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 RFPL4AA6NLU0 287 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 OR2AT4A6NND4 320 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FOXI3A8MTJ6 420 aaPredicted RBP12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A12PA8MX19 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A5PA8MXJ8 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A23PA8MXZ1 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 B4DSR2 109 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 RFPL4AL1F8VTS6 287 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 SH2D1BO14796 132 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 SOCS1O15524 211 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 CHRM2P08172 466 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A15PP0C7V4 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A13PP0C7W8 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A14PP0C7W9 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 FAM90A24PP0C7X0 464 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 PSG2P11465 335 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.42
TRIM28-207ENST00000597136 MPV17LQ2QL34 196 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 RAB12Q6IQ22 244 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 Q6P435 159 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 ZNF841Q6ZN19 808 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 DCDC5Q6ZRR9 648 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 CCDC190Q86UF4 302 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 DTX3Q8N9I9 347 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 OR4M1Q8NGD0 313 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 PHF21AQ96BD5 680 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 IFT22Q9H7X7 185 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 MIOXQ9UGB7 285 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 OR14J1Q9UGF5 321 aa12.46□□□□□ -0.42
TRIM28-207ENST00000597136 IGKV1D-17A0A075B6S4 117 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 KIAA1324LA8MWY0 1029 aaPredicted RBP12.45□□□□□ -0.42
TRIM28-207ENST00000597136 ADAM20O43506 726 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 XRCC3O43542 346 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 SCGNO76038 276 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 OR7C1O76099 320 aaPredicted RBP12.45□□□□□ -0.42
TRIM28-207ENST00000597136 MSMBP08118 114 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 BLVRBP30043 206 aaPredicted RBP12.45□□□□□ -0.42
TRIM28-207ENST00000597136 PRDX2P32119 198 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 TALDO1P37837 337 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 TMEM50BP56557 158 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 SCN1BQ07699 218 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 IKZF1Q13422 519 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 STUMQ69YW2 141 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 ANGPTL6Q8NI99 470 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 NEIL1Q96FI4 390 aaPredicted RBP12.45□□□□□ -0.42
TRIM28-207ENST00000597136 SOSTQ9BQB4 213 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 SEBOXQ9HB31 216 aaPredicted RBP12.45□□□□□ -0.42
TRIM28-207ENST00000597136 MMP26Q9NRE1 261 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 GLS2Q9UI32 602 aa12.45□□□□□ -0.42
TRIM28-207ENST00000597136 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 DEGS1O15121 323 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 OR2H2O95918 312 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 HAND1O96004 215 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 SELLP14151 372 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 FUT3P21217 361 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
TRIM28-207ENST00000597136 LSAMPQ13449 338 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 PLAC9Q5JTB6 97 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 IZUMO1Q8IYV9 350 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 CD177Q8N6Q3 437 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 NUDT16L1Q9BRJ7 211 aaKnown RBP12.44□□□□□ -0.42
TRIM28-207ENST00000597136 ZNF222Q9UK12 451 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 CUBNO60494 3623 aa12.44□□□□□ -0.42
TRIM28-207ENST00000597136 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 TRAV24A0A0B4J272 114 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 FABP12A6NFH5 140 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
TRIM28-207ENST00000597136 PDCD6O75340 191 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 CHATP28329 748 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 ETV6P41212 452 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 MADCAM1Q13477 382 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 SPANXN2Q5MJ10 180 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 RTN4RL2Q86UN3 420 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 CHST4Q8NCG5 386 aa12.43□□□□□ -0.42
TRIM28-207ENST00000597136 OR8B3Q8NGG8 313 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms