RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 UBE2E1P51965 193 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 P2RX3P56373 397 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 EMX1Q04741 257 aaPredicted RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 AESQ08117 197 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 MLLT11Q13015 90 aaPredicted RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 TBCEQ15813 527 aaPredicted RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 SSX1Q16384 188 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 KIAA2026Q5HYC2 2103 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 LDLRAD2Q5SZI1 272 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 UTF1Q5T230 341 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 FIP1L1Q6UN15 594 aaKnown RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 BAIAP2L2Q6UXY1 529 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 RBMS3Q6XE24 437 aaKnown RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 ZNF782Q6ZMW2 699 aaPredicted RBP9.09□□□□□ -0.95
VRK3-210ENST00000596121 JAGN1Q8N5M9 183 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 MS4A15Q8N5U1 240 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 OR5D13Q8NGL4 314 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 PLPPR1Q8TBJ4 325 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 FAM216AQ8WUB2 273 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 ZFAND2BQ8WV99 257 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 UFD1Q92890 307 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 ISYNA1Q9NPH2 558 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 ACOT13Q9NPJ3 140 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 ING3Q9NXR8 418 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 IL36GQ9NZH8 169 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 CKLFQ9UBR5 152 aa9.09□□□□□ -0.95
VRK3-210ENST00000596121 CLDN34H7C241 214 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 TRIM77I1YAP6 450 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 HSPB6O14558 160 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 GEMIN2O14893 280 aaKnown RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 IGHV4-59P01825 116 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 UCHL1P09936 223 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 ZNF728P0DKX0 622 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 SRMP19623 302 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 SERPINA2P20848 420 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 COX7A1P24310 79 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 EEF1B2P24534 225 aaKnown RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 ERP29P30040 261 aaKnown RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 SAA4P35542 130 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 BMXP51813 675 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 FABP5Q01469 135 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 BLMHQ13867 455 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 IL13RA2Q14627 380 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 ATXN7L3Q14CW9 347 aaPredicted RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 SLC22A6Q4U2R8 563 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 BRICD5Q6PL45 260 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 GLIPR1L1Q6UWM5 242 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 CDH26Q8IXH8 852 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 SPARTQ8N0X7 666 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 OSR2Q8N2R0 312 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 CPNE2Q96FN4 548 aaPredicted RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 METTL9Q9H1A3 318 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 TNFRSF19Q9NS68 423 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 GLS2Q9UI32 602 aa9.08□□□□□ -0.96
VRK3-210ENST00000596121 MRPS28Q9Y2Q9 187 aaKnown RBP9.08□□□□□ -0.96
VRK3-210ENST00000596121 FBN3Q75N90 2809 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 hADV38S2A0JD32 116 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ODAMA1E959 279 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 MEIOCA2RUB1 952 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 TMEM89A2RUT3 159 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 CSN2P05814 226 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
VRK3-210ENST00000596121 CGB3P0DN86 165 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 CGB7P0DN87 165 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 MAPK3P27361 379 aaPredicted RBP9.07□□□□□ -0.96
VRK3-210ENST00000596121 IER3P46695 156 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 RBM11P57052 281 aaKnown RBP9.07□□□□□ -0.96
VRK3-210ENST00000596121 GABARAPL2P60520 117 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 TAF9Q16594 264 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 NHLRC3Q5JS37 347 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 NCR3LG1Q68D85 454 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ZNF367Q7RTV3 350 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 LHFPL4Q7Z7J7 247 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 DYNAPQ8N1N2 210 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 SUMF2Q8NBJ7 301 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 CHST4Q8NCG5 386 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 TBC1D15Q8TC07 691 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 CORO2AQ92828 525 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ZNF714Q96N38 554 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 CHIAQ9BZP6 476 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 KCNK15Q9H427 330 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 BANF2Q9H503 90 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ST3GAL6Q9Y274 331 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 LINC00312Q9Y6C7 94 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 ANK2Q01484 3957 aa9.07□□□□□ -0.96
VRK3-210ENST00000596121 TRAV39A0A0B4J263 110 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 SHISA3A0PJX4 238 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 IGHV1-8P0DP01 117 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 C17orf58Q2M2W7 97 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 HSD17B12Q53GQ0 312 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 PAN3Q58A45 887 aaKnown RBP9.06□□□□□ -0.96
VRK3-210ENST00000596121 KRBOX4Q5JUW0 171 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 C1orf100Q5SVJ3 147 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms