RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SLC33A1O00400 549 aaPredicted RBP21.18■□□□□ 0.98
TRIM28-204ENST00000594806 OR3A1P47881 315 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 KCNJ3P48549 501 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 RBM11P57052 281 aaKnown RBP21.18■□□□□ 0.98
TRIM28-204ENST00000594806 GUCA2AQ02747 115 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 MPV17LQ2QL34 196 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 VMO1Q7Z5L0 202 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 OR4M1Q8NGD0 313 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 SUCNR1Q9BXA5 334 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 OCEL1Q9H607 264 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 VCX3AQ9NNX9 186 aa21.18■□□□□ 0.98
TRIM28-204ENST00000594806 H3BUI4 141 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 IGHV4-38-2P0DP08 117 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 PRTN3P24158 256 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 CALRP27797 417 aaKnown RBP21.17■□□□□ 0.98
TRIM28-204ENST00000594806 NCR3LG1Q68D85 454 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 Q8N7P7 452 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 TSPAN14Q8NG11 270 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 CHST6Q9GZX3 395 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 ZNF696Q9H7X3 374 aa21.17■□□□□ 0.98
TRIM28-204ENST00000594806 TRAV1-2A0A0B4J238 106 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 CENPVL3A0A0U1RRI6 287 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 TCF21O43680 179 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 RBP4P02753 201 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 TUSC1Q2TAM9 212 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 PIGYQ3MUY2 71 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 OR6M1Q8NGM8 313 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 C1orf147Q96MC9 270 aaPredicted RBP21.16■□□□□ 0.98
TRIM28-204ENST00000594806 CST11Q9H112 138 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 ZNF69Q9UC07 566 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 LINC00312Q9Y6C7 94 aa21.16■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A10PA6NDY2 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A18PA6NE21 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A16PA6NEW6 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A20PA6NIJ5 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A8PA6NJQ4 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A7PA6NKC0 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A22PA8MWA6 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A12PA8MX19 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A5PA8MXJ8 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A23PA8MXZ1 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 PDCD5O14737 125 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A15PP0C7V4 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A13PP0C7W8 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A14PP0C7W9 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FAM90A24PP0C7X0 464 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 HTR2CP28335 458 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 FGF9P31371 208 aaPredicted RBP21.15■□□□□ 0.98
TRIM28-204ENST00000594806 P2RX3P56373 397 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 PAX5Q02548 391 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 EDDM3AQ14507 147 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 LHX4Q969G2 390 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 JMJD8Q96S16 334 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 NCOR1P1Q9H4R4 102 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 SPACA1Q9HBV2 294 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 STUB1Q9UNE7 303 aa21.15■□□□□ 0.98
TRIM28-204ENST00000594806 IGHV1-69DA0A0B4J2H0 117 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 SLC22A1O15245 554 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 IGHV1-69P01742 117 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 MYL9P24844 172 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 ZNF273Q14593 569 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 NEDD8Q15843 81 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 PAN3Q58A45 887 aaKnown RBP21.14■□□□□ 0.97
TRIM28-204ENST00000594806 BARHL1Q9BZE3 327 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 PPA2Q9H2U2 334 aa21.14■□□□□ 0.97
TRIM28-204ENST00000594806 UBE2J1Q9Y385 318 aaPredicted RBP21.14■□□□□ 0.97
TRIM28-204ENST00000594806 TRAV24A0A0B4J272 114 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 C17orf98A8MV24 154 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 SLC17A2O00624 439 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 GEMIN2O14893 280 aaKnown RBP21.13■□□□□ 0.97
TRIM28-204ENST00000594806 OR7C1O76099 320 aaPredicted RBP21.13■□□□□ 0.97
TRIM28-204ENST00000594806 ZNF728P0DKX0 622 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 CORO2AQ92828 525 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 TNFRSF14Q92956 283 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 ZNF714Q96N38 554 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 HEXA-AS1Q9H8Q6 139 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 SIRT7Q9NRC8 400 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 SSR3Q9UNL2 185 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 AK6Q9Y3D8 172 aaKnown RBP21.13■□□□□ 0.97
TRIM28-204ENST00000594806 V9GY05 133 aa21.13■□□□□ 0.97
TRIM28-204ENST00000594806 IGHV3OR16-10A0A075B7F0 116 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 A0A1W2PP11 408 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 BPNT1O95861 308 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 MGMTP16455 207 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 DLX6P56179 175 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 ERVFRD-1P60508 538 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 KIAA2026Q5HYC2 2103 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 KRBOX4Q5JUW0 171 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 RBMS3Q6XE24 437 aaKnown RBP21.12■□□□□ 0.97
TRIM28-204ENST00000594806 C11orf42Q8N5U0 333 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 KCNG3Q8TAE7 436 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 SLC6A7Q99884 636 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 PLGRKTQ9HBL7 147 aa21.12■□□□□ 0.97
TRIM28-204ENST00000594806 TRGV10A0A0A0MS01 117 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 CRTAPO75718 401 aaPredicted RBP21.11■□□□□ 0.97
TRIM28-204ENST00000594806 UBE2E1P51965 193 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 AESQ08117 197 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 TAF9Q16594 264 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 SUMF2Q8NBJ7 301 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 C22orf15Q8WYQ4 148 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms